Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012508.1-P | Field mustard | nucleus | 87.26 | 87.89 |
| CDY51595 | Canola | nucleus | 87.02 | 87.65 |
| CDY03883 | Canola | nucleus | 87.26 | 87.05 |
| Zm00001d033021_P001 | Maize | cytosol | 33.89 | 77.05 |
| PGSC0003DMT400009464 | Potato | cytosol | 42.31 | 73.03 |
| KRH33999 | Soybean | nucleus | 72.84 | 67.63 |
| KRG92800 | Soybean | nucleus | 71.63 | 67.27 |
| Zm00001d019681_P002 | Maize | nucleus | 33.65 | 65.73 |
| Solyc01g098350.2.1 | Tomato | nucleus | 67.07 | 65.49 |
| HORVU6Hr1G056640.2 | Barley | plastid | 13.22 | 64.71 |
| PGSC0003DMT400057824 | Potato | nucleus | 67.55 | 62.72 |
| GSMUA_Achr8P06830_001 | Banana | nucleus | 66.11 | 61.8 |
| TraesCS6B01G362300.1 | Wheat | nucleus | 59.38 | 60.24 |
| TraesCS6D01G310800.2 | Wheat | nucleus | 59.13 | 60.0 |
| TraesCS6A01G331500.1 | Wheat | nucleus | 59.38 | 59.95 |
| Os01t0377500-01 | Rice | nucleus | 61.3 | 59.72 |
| KXG30252 | Sorghum | nucleus | 43.75 | 56.35 |
| HORVU6Hr1G080430.3 | Barley | nucleus | 56.97 | 53.14 |
| VIT_12s0028g00110.t01 | Wine grape | nucleus | 67.55 | 51.56 |
| Zm00001d019684_P002 | Maize | mitochondrion | 32.21 | 48.03 |
| CDY27590 | Canola | cytosol | 59.13 | 39.55 |
| Bra032800.1-P | Field mustard | cytosol | 58.89 | 39.39 |
| Zm00001d033023_P001 | Maize | cytosol | 21.63 | 36.59 |
| AT1G35440.1 | Thale cress | cytosol | 19.23 | 32.39 |
| CDX84949 | Canola | cytosol | 24.52 | 29.06 |
| AT1G27630.1 | Thale cress | cytosol | 17.31 | 22.71 |
| AT5G48640.1 | Thale cress | cytosol | 12.26 | 20.16 |
| AT4G19600.1 | Thale cress | nucleus | 23.56 | 18.11 |
| AT4G19560.1 | Thale cress | nucleus | 19.71 | 17.83 |
| AT5G48630.2 | Thale cress | cytosol, nucleus, plastid | 10.58 | 17.19 |
| AT5G45190.2 | Thale cress | nucleus | 24.28 | 17.12 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.8 | EntrezGene:817183 | ProteinID:AAC14513.2 | ProteinID:AEC07836.1 | ProteinID:AEC07837.1 |
| ProteinID:AEC07838.1 | EMBL:AF249734 | EMBL:AK226505 | EMBL:AK317155 | ArrayExpress:AT2G26430 | EnsemblPlantsGene:AT2G26430 |
| RefSeq:AT2G26430 | TAIR:AT2G26430 | RefSeq:AT2G26430-TAIR-G | EnsemblPlants:AT2G26430.1 | TAIR:AT2G26430.1 | EMBL:AY086218 |
| EMBL:AY091085 | EMBL:AY150419 | Unigene:At.19077 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_N |
| GO:GO:0000003 | GO:GO:0000307 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0007049 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009987 | GO:GO:0016538 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0045737 | GO:GO:0045944 |
| GO:GO:0051301 | GO:GO:0051321 | GO:GO:1901409 | RefSeq:NP_001077962.1 | RefSeq:NP_001077963.1 | RefSeq:NP_565622.1 |
| PFAM:PF00134 | PIRSF:PIRSF036580 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PANTHER:PTHR10026 | PANTHER:PTHR10026:SF100 | UniProt:Q8RWV3 | Symbol:RCY1 | SMART:SM00385 | SUPFAM:SSF47954 |
| UniParc:UPI00000ABF25 | SEG:seg | : | : | : | : |
Description
CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
Coordinates
chr2:-:11243128..11246058
Molecular Weight (calculated)
47558.0 Da
IEP (calculated)
9.180
GRAVY (calculated)
-0.875
Length
416 amino acids
Sequence
(BLAST)
(BLAST)
001: MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.