Factsheet for Zm00001d033023_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019684_P002	Maize	mitochondrion	52.44	46.24
KXG30252	Sorghum	nucleus	43.5	33.13
TraesCS6D01G310800.2	Wheat	nucleus	47.97	28.78
TraesCS6B01G362300.1	Wheat	nucleus	47.56	28.54
TraesCS6A01G331500.1	Wheat	nucleus	47.56	28.4
HORVU6Hr1G080430.3	Barley	nucleus	47.15	26.01
CDY03883	Canola	nucleus	39.43	23.26
Bra012508.1-P	Field mustard	nucleus	38.62	23.0
CDY51595	Canola	nucleus	38.21	22.76
Solyc01g098350.2.1	Tomato	nucleus	39.02	22.54
GSMUA_Achr8P06830_001	Banana	nucleus	40.65	22.47
PGSC0003DMT400009464	Potato	cytosol	21.54	21.99
PGSC0003DMT400057824	Potato	nucleus	39.43	21.65
AT2G26430.1	Thale cress	cytosol	36.59	21.63
KRH33999	Soybean	nucleus	39.02	21.43
KRG92800	Soybean	nucleus	37.4	20.77
VIT_12s0028g00110.t01	Wine grape	nucleus	40.65	18.35
Zm00001d038497_P001	Maize	cytosol, extracellular, peroxisome	9.35	14.29
Bra032800.1-P	Field mustard	cytosol	34.55	13.67
CDY27590	Canola	cytosol	34.55	13.67
CDX84949	Canola	cytosol	15.04	10.54
Zm00001d027790_P001	Maize	cytosol	10.16	9.26
Zm00001d026030_P014	Maize	nucleus	18.29	9.18
Zm00001d020158_P001	Maize	nucleus	14.63	8.76
Zm00001d027376_P002	Maize	nucleus, plastid	18.7	8.24
Zm00001d017392_P009	Maize	cytosol	13.01	4.88
Zm00001d021031_P002	Maize	endoplasmic reticulum, vacuole	6.1	4.76
Zm00001d051291_P003	Maize	cytosol	12.6	4.61
Zm00001d015164_P001	Maize	cytosol	9.35	4.23
Zm00001d033021_P001	Maize	cytosol	2.44	3.28
Zm00001d019681_P002	Maize	nucleus	2.44	2.82
HORVU6Hr1G056640.2	Barley	plastid	0.81	2.35
Zm00001d040936_P002	Maize	plastid	2.44	1.83

Protein Annotations

EnsemblPlants:Zm00001d033023_P001	EnsemblPlants:Zm00001d033023_T001	EnsemblPlantsGene:Zm00001d033023	Gene3D:1.10.472.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Cyclin-like_sf	PANTHER:PTHR10026	PANTHER:PTHR10026:SF100	ProteinID:ONM06617.1	SEG:seg
SUPFAM:SSF47954	TMHMM:TMhelix	UniParc:UPI00084414FD	UniProt:A0A1D6KVT8	MapMan:35.1	:

Description

Cyclin-L1-1

Coordinates

chr1:+:247444675..247447102

Molecular Weight (calculated)

27210.4 Da

IEP (calculated)

5.241

GRAVY (calculated)

-0.389

Length

246 amino acids

Sequence
(BLAST)

001: MGREEGAERS VEELSSLRTT LCVRFKSEVV ACGVVYAAAR RHRVPLPEDP PWWTVFDADE AGIQEVCSVL AHLYSLPKAQ YIPVYKEYDS FTVKRISDPQ
101: ALKESPARAV ASDKGTPIPS SSNQEKDSVA KTIPNRVKEK SDDEVEKEKE KERDQEGGNV MLGVGILIMI AGVVTLIARG IGDVALGIEV QDTQTRRNQG
201: AIHHTTELTT TVRIHLVKKI GIDTIDQEQH EFVEPSSPLV PKILEN

Best Arabidopsis Sequence Match ( AT2G26430.2 )
(BLAST)

001: MATGQVLFQR FYCKKSLAKF DVKIVAASCV WLASKLEENP KKARQVIIVF HRMECRRENL PLEHLDMYAK KFSELKVELS RTERHILKEM GFVCHVEHPH
101: KFISNYLATL ETPPELRQEA WNLANDSLRT TLCVRFRSEV VACGVVYAAA RRFQVPLPEN PPWWKAFDAD KSSIDEVCRV LAHLYSLPKA QYISVCKDGK
201: PFTFSSRSGN SQGQSATKDL LPGAGEAVDT KCTAGSANND LKDGMVTTPH EKATDSKKSG TESNSQPIVG DSSYERSKVG DRERESDREK ERGRERDRGR
301: SHRGRDSDRD SDRERDKLKD RSHHRSRDRL KDSGGHSDKS RHHSSRDRDY RDSSKDRRRH H

Arabidopsis Description

CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
SUBAcon: [mitochondrion,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.