Factsheet for Zm00001d019684_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033023_P001	Maize	cytosol	46.24	52.44
Os01t0377500-01	Rice	nucleus	70.25	45.9
GSMUA_Achr8P06830_001	Banana	nucleus	57.71	36.18
Solyc01g098350.2.1	Tomato	nucleus	52.69	34.51
PGSC0003DMT400057824	Potato	nucleus	53.41	33.26
CDY03883	Canola	nucleus	49.46	33.09
Bra012508.1-P	Field mustard	nucleus	48.75	32.93
KRH33999	Soybean	nucleus	52.69	32.81
CDY51595	Canola	nucleus	48.39	32.69
AT2G26430.1	Thale cress	cytosol	48.03	32.21
KRG92800	Soybean	nucleus	50.54	31.83
PGSC0003DMT400009464	Potato	cytosol	22.22	25.73
VIT_12s0028g00110.t01	Wine grape	nucleus	45.88	23.49
CDY27590	Canola	cytosol	36.92	16.56
Bra032800.1-P	Field mustard	cytosol	36.92	16.56
Zm00001d038497_P001	Maize	cytosol, extracellular, peroxisome	8.24	14.29
CDX84949	Canola	cytosol	17.92	14.24
Zm00001d026030_P014	Maize	nucleus	17.2	9.8
Zm00001d027790_P001	Maize	cytosol	9.32	9.63
Zm00001d033021_P001	Maize	cytosol	5.73	8.74
Zm00001d027376_P002	Maize	nucleus, plastid	17.2	8.6
Zm00001d020158_P001	Maize	nucleus	12.19	8.27
Zm00001d019681_P002	Maize	nucleus	6.09	7.98
Zm00001d015164_P001	Maize	cytosol	13.98	7.17
Zm00001d017392_P009	Maize	cytosol	15.05	6.4
Zm00001d051291_P003	Maize	cytosol	14.7	6.09
Zm00001d021031_P002	Maize	endoplasmic reticulum, vacuole	5.38	4.76
Zm00001d040936_P002	Maize	plastid	2.15	1.83

Protein Annotations

EnsemblPlants:Zm00001d019684_P002	EnsemblPlants:Zm00001d019684_T002	EnsemblPlantsGene:Zm00001d019684	Gene3D:1.10.472.10	InterPro:Cyclin-like_sf	PANTHER:PTHR10026
PANTHER:PTHR10026:SF100	ProteinID:ONM53548.1	ProteinID:ONM53549.1	SEG:seg	SUPFAM:SSF47954	UniParc:UPI000842ABFB
UniProt:A0A1D6HZR2	MapMan:35.1	:	:	:	:

Description

Cyclin-L1-1

Coordinates

chr7:+:50704976..50707942

Molecular Weight (calculated)

32107.2 Da

IEP (calculated)

10.091

GRAVY (calculated)

-1.218

Length

279 amino acids

Sequence
(BLAST)

001: MWEAAVVAYR RRRQQYCAWT RVLVSMGRRR PKSSFCSDCH DCSLALRTTL CVRFKSEVVA CGVVYAAARR HRVPLPEDPP WWTVFDADEA GIQEVCRVLA
101: HLYSLPKAQY IPVYKDNDSF TVKRISDLQA SKESPARAVA SDKGTPVPSS SSQEKDPVAK TILNKVKEKS DDEGKPLPAE FDGKENPVAN SKNDKSDSGV
201: DRSRERERSR GRERDARGRD SDRDSRGRES DRERDRRRCS RERSSGHSDK EKSRRHSSRD RADYYNSHSS REKDRHRHH

Best Arabidopsis Sequence Match ( AT2G26430.1 )
(BLAST)

001: MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH

Arabidopsis Description

CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.