Factsheet for Os01t0377500-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G362300.1	Wheat	nucleus	80.8	84.15
TraesCS6A01G331500.1	Wheat	nucleus	81.03	83.98
TraesCS6D01G310800.2	Wheat	nucleus	80.56	83.9
KXG30252	Sorghum	nucleus	63.47	83.9
HORVU6Hr1G056640.2	Barley	plastid	16.63	83.53
HORVU6Hr1G080430.3	Barley	nucleus	78.22	74.89
PGSC0003DMT400009464	Potato	cytosol	40.98	72.61
GSMUA_Achr8P06830_001	Banana	nucleus	73.3	70.34
Zm00001d019684_P002	Maize	mitochondrion	45.9	70.25
Solyc01g098350.2.1	Tomato	nucleus	65.34	65.49
Bra012508.1-P	Field mustard	nucleus	61.12	63.2
KRH33999	Soybean	nucleus	66.28	63.17
CDY51595	Canola	nucleus	60.89	62.95
CDY03883	Canola	nucleus	61.36	62.83
KRG92800	Soybean	nucleus	64.64	62.3
PGSC0003DMT400057824	Potato	nucleus	65.11	62.05
AT2G26430.1	Thale cress	cytosol	59.72	61.3
VIT_12s0028g00110.t01	Wine grape	nucleus	63.93	50.09
CDY27590	Canola	cytosol	44.5	30.55
Bra032800.1-P	Field mustard	cytosol	44.5	30.55
Os02t0133000-00	Rice	extracellular	21.78	20.85
CDX84949	Canola	cytosol	16.86	20.51
Os09t0504400-01	Rice	nucleus	12.18	20.23
Os12t0485400-01	Rice	nucleus	24.82	19.52
Os02t0438200-01	Rice	nucleus	24.59	16.67

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.8	EntrezGene:4325450	EMBL:AK069233	ProteinID:BAB39257.1	ProteinID:BAF04997.1
ProteinID:BAS72212.1	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_N	ProteinID:EEE54609.1	GO:GO:0000307
GO:GO:0003674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006464	GO:GO:0006950	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009506	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0016538	GO:GO:0019538
GO:GO:0030234	GO:GO:0045737	GO:GO:0045944	GO:GO:0051301	GO:GO:1901409	EnsemblPlantsGene:Os01g0377500
EnsemblPlants:Os01t0377500-01	PFAM:PF00134	PIRSF:PIRSF036580	PANTHER:PTHR10026	PANTHER:PTHR10026:SF100	UniProt:Q9AS36
SMART:SM00385	SUPFAM:SSF47954	UniParc:UPI00000A3A0A	RefSeq:XP_015622140.1	SEG:seg	:

Description

CYCLIN-L1-1Similar to Ania-6a type cyclin. (Os01t0377500-01)

Coordinates

chr1:-:15618227..15624499

Molecular Weight (calculated)

49129.2 Da

IEP (calculated)

8.983

GRAVY (calculated)

-1.019

Length

427 amino acids

Sequence
(BLAST)

001: MIYTAIDTFY LTDEQLRDSP SRKDGIDEAT ETALRVYGCD LIQESGILLK LPQAVMATAQ VLFHRFYCKK SFVRFSVKRV AASCVWLAGK LEESPRRSKH
101: IIIVFHRMEC RRENVPIEHL DVFSKKYSDL KHDLVRTERH LLKEMGFICH VEHPHKFISN YLATLEAPEL TQEAWNLAND SLRTTLCVRF KSEVVACGVV
201: YAAARRHGVP LPEDPPWWNV FDADEAGIQE VCRVLAHLYS LPKSQYIQVY KDNDSFTHRR TSDTNASKES PATTVASDKG TPVPSSSSQE KDALIKAGSD
301: KVKEKGDDDG KTLPSEPNGK EGPAVNLKSE KSESNVDRSR ERERDRSRGR DRDSRGRDSD RDSKGRDSDR ERERDREADR DRQRRHHSKD RSSGYSDKEK
401: SRHRSSRDRG DHYSSHSSRD KDRHRRQ

Best Arabidopsis Sequence Match ( AT2G26430.1 )
(BLAST)

001: MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH

Arabidopsis Description

CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.