Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27590 | Canola | cytosol | 60.97 | 34.41 |
| AT2G26430.1 | Thale cress | cytosol | 29.06 | 24.52 |
| CDY03883 | Canola | nucleus | 28.77 | 24.22 |
| CDY51595 | Canola | nucleus | 28.49 | 24.21 |
| PGSC0003DMT400009464 | Potato | cytosol | 15.95 | 23.24 |
| KRG92800 | Soybean | nucleus | 25.64 | 20.32 |
| KRH33999 | Soybean | nucleus | 25.64 | 20.09 |
| Solyc01g098350.2.1 | Tomato | nucleus | 23.93 | 19.72 |
| Zm00001d033021_P001 | Maize | cytosol | 9.69 | 18.58 |
| PGSC0003DMT400057824 | Potato | nucleus | 23.65 | 18.53 |
| Zm00001d019684_P002 | Maize | mitochondrion | 14.24 | 17.92 |
| GSMUA_Achr8P06830_001 | Banana | nucleus | 22.51 | 17.75 |
| TraesCS6B01G362300.1 | Wheat | nucleus | 20.23 | 17.32 |
| TraesCS6D01G310800.2 | Wheat | nucleus | 20.23 | 17.32 |
| TraesCS6A01G331500.1 | Wheat | nucleus | 20.23 | 17.23 |
| Os01t0377500-01 | Rice | nucleus | 20.51 | 16.86 |
| Zm00001d019681_P002 | Maize | nucleus | 9.69 | 15.96 |
| HORVU6Hr1G080430.3 | Barley | nucleus | 19.66 | 15.47 |
| VIT_12s0028g00110.t01 | Wine grape | nucleus | 23.93 | 15.41 |
| Zm00001d033023_P001 | Maize | cytosol | 10.54 | 15.04 |
| KXG30252 | Sorghum | nucleus | 11.4 | 12.38 |
| CDY05665 | Canola | endoplasmic reticulum, extracellular | 2.85 | 9.17 |
| CDX71123 | Canola | nucleus | 5.41 | 7.2 |
| CDX88692 | Canola | nucleus | 5.41 | 7.2 |
| CDY60279 | Canola | cytosol | 5.41 | 6.07 |
| CDY03933 | Canola | cytosol | 5.41 | 6.07 |
| CDY69301 | Canola | cytosol | 4.27 | 5.93 |
| CDY51053 | Canola | cytosol | 4.27 | 5.93 |
| CDY51052 | Canola | cytosol | 3.99 | 5.58 |
| CDY66082 | Canola | cytosol | 3.99 | 5.56 |
| CDY26395 | Canola | nucleus | 8.26 | 5.51 |
| CDY11776 | Canola | cytosol | 4.84 | 5.31 |
| CDX90099 | Canola | nucleus | 4.84 | 5.28 |
| CDX86291 | Canola | cytosol | 3.7 | 5.16 |
| CDX85352 | Canola | cytosol | 3.7 | 5.16 |
| CDX82583 | Canola | nucleus | 8.26 | 5.11 |
| CDY65933 | Canola | nucleus | 8.26 | 5.11 |
| CDX76472 | Canola | nucleus | 7.69 | 5.1 |
| CDY09329 | Canola | nucleus | 7.69 | 5.08 |
| CDY39416 | Canola | nucleus | 8.26 | 5.01 |
| CDX99359 | Canola | nucleus | 7.41 | 4.87 |
| CDX99363 | Canola | nucleus | 5.41 | 4.71 |
| CDX78940 | Canola | nucleus | 5.41 | 4.69 |
| CDY24526 | Canola | cytosol, nucleus, peroxisome | 3.42 | 3.8 |
| CDY54138 | Canola | cytosol | 3.42 | 3.8 |
| HORVU6Hr1G056640.2 | Barley | plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX84949 | EnsemblPlantsGene:GSBRNA2T00142319001 | Gene3D:1.10.472.10 | InterPro:CHP01589_pln | InterPro:Cyclin-like_sf | PANTHER:PTHR10026 |
| PANTHER:PTHR10026:SF100 | PFAM:PF09713 | ProteinID:CDX84949 | ProteinID:CDX84949.1 | SUPFAM:SSF47954 | UniParc:UPI0004EE894B |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC05g21060D
Coordinates
chrLK031839:-:607126..610147
Molecular Weight (calculated)
39375.1 Da
IEP (calculated)
7.502
GRAVY (calculated)
-0.451
Length
351 amino acids
Sequence
(BLAST)
(BLAST)
001: MKDNRSKDEI VRILQQQHAI PVYLTMKAWD QIEIESPGFF EEYFVQTLLN PDAETMGTAG RDTGASSSSL HVPPPTGDAL IPVQQALSSG TAQNVPIVTR
101: AQVPPLTDNR ASSSSSQVPP ETANAPVQQP LSPKTEILMK ILATLVEMKS KQDQMLHLMS DGRMRTRDEQ DQTQQERPRP QAVMATGQVL FHSCELCLAC
201: IKTGREPKKA RRVIVVFHRM ECRRENFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DRFQVPLPDN PPWWKSFDAD KSGIDQVCRV LALLYSLPKA
301: QYISVCKDGK PFTFSTRSGN TQAQSSTKDV LPAVHSVDTK CVQLITSLRM E
101: AQVPPLTDNR ASSSSSQVPP ETANAPVQQP LSPKTEILMK ILATLVEMKS KQDQMLHLMS DGRMRTRDEQ DQTQQERPRP QAVMATGQVL FHSCELCLAC
201: IKTGREPKKA RRVIVVFHRM ECRRENFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DRFQVPLPDN PPWWKSFDAD KSGIDQVCRV LALLYSLPKA
301: QYISVCKDGK PFTFSTRSGN TQAQSSTKDV LPAVHSVDTK CVQLITSLRM E
001: MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH
Arabidopsis Description
CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.