Factsheet for Zm00001d033021_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G056640.2	Barley	plastid	40.44	87.06
Zm00001d019681_P002	Maize	nucleus	94.54	81.22
PGSC0003DMT400009464	Potato	cytosol	69.4	52.7
TraesCS6B01G362300.1	Wheat	nucleus	93.99	41.95
TraesCS6A01G331500.1	Wheat	nucleus	93.99	41.75
TraesCS6D01G310800.2	Wheat	nucleus	93.44	41.71
HORVU6Hr1G080430.3	Barley	nucleus	93.99	38.56
Bra012508.1-P	Field mustard	nucleus	80.87	35.84
CDY51595	Canola	nucleus	80.87	35.84
GSMUA_Achr8P06830_001	Banana	nucleus	86.34	35.51
Solyc01g098350.2.1	Tomato	nucleus	82.51	35.45
CDY03883	Canola	nucleus	80.33	35.25
AT2G26430.1	Thale cress	cytosol	77.05	33.89
KRG92800	Soybean	nucleus	81.97	33.86
PGSC0003DMT400057824	Potato	nucleus	81.97	33.48
KRH33999	Soybean	nucleus	81.42	33.26
KXG30252	Sorghum	nucleus	57.38	32.51
VIT_12s0028g00110.t01	Wine grape	nucleus	81.97	27.52
Zm00001d027790_P001	Maize	cytosol	31.15	21.11
Zm00001d038497_P001	Maize	cytosol, extracellular, peroxisome	16.39	18.63
Zm00001d040936_P002	Maize	plastid	32.24	17.99
Bra032800.1-P	Field mustard	cytosol	58.47	17.2
CDY27590	Canola	cytosol	58.47	17.2
Zm00001d021031_P002	Maize	endoplasmic reticulum, vacuole	24.59	14.29
Zm00001d020158_P001	Maize	nucleus	29.51	13.14
Zm00001d026030_P014	Maize	nucleus	31.69	11.84
Zm00001d015164_P001	Maize	cytosol	32.24	10.85
Zm00001d027376_P002	Maize	nucleus, plastid	32.24	10.57
Zm00001d051291_P003	Maize	cytosol	36.07	9.81
Zm00001d017392_P009	Maize	cytosol	34.97	9.76
CDX84949	Canola	cytosol	18.58	9.69
Zm00001d019684_P002	Maize	mitochondrion	8.74	5.73
Zm00001d033023_P001	Maize	cytosol	3.28	2.44

Protein Annotations

EnsemblPlants:Zm00001d033021_P001	EnsemblPlants:Zm00001d033021_T001	EnsemblPlantsGene:Zm00001d033021	Gene3D:1.10.472.10	InterPro:Cyclin-like	InterPro:Cyclin-like_sf
InterPro:Cyclin_N	PANTHER:PTHR10026	PANTHER:PTHR10026:SF100	PFAM:PF00134	PIRSF:PIRSF036580	ProteinID:ONM06613.1
ProteinID:ONM06614.1	ProteinID:ONM06615.1	SMART:SM00385	SUPFAM:SSF47954	UniParc:UPI0008451EC7	UniProt:A0A1D6KVT5
MapMan:13.1.1.1.8	:	:	:	:	:

Description

Cyclin-L1-1

Coordinates

chr1:+:247431338..247433701

Molecular Weight (calculated)

21495.1 Da

IEP (calculated)

8.723

GRAVY (calculated)

-0.308

Length

183 amino acids

Sequence
(BLAST)

001: MIYTAIDTFY LTEEQLRNSP SRKDGIDEAT ETVLRVYGCD LIQESGILLR LPQAVMATAQ VLFHRFYCKK SFVRFSAKRV AASCVWLAGK LEESPRKSKH
101: IIFVFHRMEC RRENLPIEFL DVFSKKYSEL RRDLIRTERH LLKEMGFICH VEHPHKFISN YLATLEAPPE LTQEAWNLAN DRK

Best Arabidopsis Sequence Match ( AT2G26430.1 )
(BLAST)

001: MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH

Arabidopsis Description

CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.