Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- peroxisome 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 2
- golgi 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97007 | Sorghum | nucleus | 79.68 | 97.67 |
| TraesCS6D01G332100.1 | Wheat | peroxisome | 75.87 | 93.0 |
| TraesCS6A01G349600.1 | Wheat | peroxisome | 75.87 | 93.0 |
| TraesCS6B01G382700.1 | Wheat | peroxisome | 75.24 | 92.22 |
| Os09t0504400-01 | Rice | nucleus | 74.29 | 91.05 |
| TraesCS5D01G289300.2 | Wheat | peroxisome | 73.97 | 90.31 |
| TraesCS5B01G281600.1 | Wheat | peroxisome | 73.97 | 90.31 |
| TraesCS5A01G282200.1 | Wheat | peroxisome | 73.97 | 90.31 |
| HORVU6Hr1G083890.3 | Barley | plastid | 78.41 | 81.52 |
| GSMUA_Achr7P02730_001 | Banana | cytosol | 66.03 | 79.09 |
| VIT_00s0360g00050.t01 | Wine grape | cytosol | 59.37 | 74.5 |
| KRH46635 | Soybean | cytosol | 59.68 | 74.31 |
| KRG99632 | Soybean | cytosol | 59.37 | 73.91 |
| Solyc06g083260.2.1 | Tomato | cytosol, nucleus | 57.14 | 72.0 |
| PGSC0003DMT400051796 | Potato | cytosol | 57.14 | 72.0 |
| AT5G48640.1 | Thale cress | cytosol | 54.29 | 67.59 |
| CDX86291 | Canola | cytosol | 53.33 | 66.67 |
| Bra037473.1-P | Field mustard | mitochondrion | 44.13 | 66.51 |
| CDY66082 | Canola | cytosol | 52.38 | 65.48 |
| CDX85352 | Canola | cytosol | 52.38 | 65.48 |
| CDY51052 | Canola | cytosol | 51.75 | 64.94 |
| AT5G48630.2 | Thale cress | cytosol, nucleus, plastid | 51.43 | 63.28 |
| CDY51053 | Canola | cytosol | 50.79 | 63.24 |
| Bra020686.1-P | Field mustard | cytosol | 50.79 | 63.24 |
| CDY69301 | Canola | cytosol | 50.79 | 63.24 |
| Bra020685.1-P | Field mustard | cytosol | 38.41 | 62.05 |
| CDY05665 | Canola | endoplasmic reticulum, extracellular | 17.78 | 51.38 |
| Zm00001d038497_P001 | Maize | cytosol, extracellular, peroxisome | 13.02 | 25.47 |
| Zm00001d033021_P001 | Maize | cytosol | 14.29 | 24.59 |
| Zm00001d027790_P001 | Maize | cytosol | 19.68 | 22.96 |
| Zm00001d019681_P002 | Maize | nucleus | 13.97 | 20.66 |
| Zm00001d020158_P001 | Maize | nucleus | 18.73 | 14.36 |
| Zm00001d040936_P002 | Maize | plastid | 14.6 | 14.02 |
| Zm00001d026030_P014 | Maize | nucleus | 21.27 | 13.67 |
| Zm00001d027376_P002 | Maize | nucleus, plastid | 21.27 | 12.01 |
| Zm00001d017392_P009 | Maize | cytosol | 20.32 | 9.76 |
| Zm00001d015164_P001 | Maize | cytosol | 16.83 | 9.74 |
| Zm00001d051291_P003 | Maize | cytosol | 20.32 | 9.51 |
| Zm00001d033023_P001 | Maize | cytosol | 4.76 | 6.1 |
| Zm00001d019684_P002 | Maize | mitochondrion | 4.76 | 5.38 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100193909 | MapMan:13.1.1.1.3 | MapMan:15.3.3.4.4 | UniProt:A0A1D6I808 | InterPro:Cyclin-like |
| InterPro:Cyclin-like_sf | InterPro:CyclinC/Ssn8 | InterPro:Cyclin_N | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016538 | GO:GO:0016592 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0045859 |
| ProteinID:ONM56179.1 | PFAM:PF00134 | PIRSF:PIRSF028758 | PANTHER:PTHR10026 | PANTHER:PTHR10026:SF7 | SMART:SM00385 |
| SUPFAM:SSF47954 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000843324F | EnsemblPlantsGene:Zm00001d021031 | EnsemblPlants:Zm00001d021031_P002 |
| EnsemblPlants:Zm00001d021031_T002 | SEG:seg | : | : | : | : |
Description
cyclin12 cyclin12
Coordinates
chr7:+:140949104..140954205
Molecular Weight (calculated)
36399.5 Da
IEP (calculated)
7.524
GRAVY (calculated)
-0.032
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLLLLYHSI LLRVAGAGDS SSTDSPGGSL RRAHRDRGST MAANFWTSSH CKQLLDPEDV DLVPAADRER GITPEEFRLI KIHMSFHIWR LAQQVKVRQR
101: VVATAIAYFR RVYTRKSMSD YDPRLVAPTC LYLASKVEES TVQARLLVFY IKKMCGSDDK YRFEIKDILE MEMKLLEALD YYLVVFHPYR PLLHFHLFVL
201: AELQVDRCPI CRLLQDAGIT DLTQFAWGLV NDTYKMDLIL IYPPYMIALA CIYIASVLKD KDTTAWFEEL RVDMNIVKNI SMEILDFYDT YKIDPQRGIP
301: EDKISPVMNK LPAKA
101: VVATAIAYFR RVYTRKSMSD YDPRLVAPTC LYLASKVEES TVQARLLVFY IKKMCGSDDK YRFEIKDILE MEMKLLEALD YYLVVFHPYR PLLHFHLFVL
201: AELQVDRCPI CRLLQDAGIT DLTQFAWGLV NDTYKMDLIL IYPPYMIALA CIYIASVLKD KDTTAWFEEL RVDMNIVKNI SMEILDFYDT YKIDPQRGIP
301: EDKISPVMNK LPAKA
001: MASNFWTSTH YKELKDPEEV NVVHPLDAQR GISVEDFRLI KLHMSNYISK LAQHIKIRQR VVATAVTYMR RVYTRKSLTE YEPRLVAPTC LYLACKAEES
101: VVHAKLLVFY MKKLYADEKF RYEIKDILEM EMKVLEALNF YLVVFHPYRS LPEFLQDSGI NDTSMTHLTW GLVNDTYRMD LILIHPPFLI TLACIYIASV
201: HKEKDIKTWF EELSVDMNIV KNIAMEILDF YENHRLFTEE RVHAAFNKLA TNP
101: VVHAKLLVFY MKKLYADEKF RYEIKDILEM EMKVLEALNF YLVVFHPYRS LPEFLQDSGI NDTSMTHLTW GLVNDTYRMD LILIHPPFLI TLACIYIASV
201: HKEKDIKTWF EELSVDMNIV KNIAMEILDF YENHRLFTEE RVHAAFNKLA TNP
Arabidopsis Description
Cyclin family protein [Source:UniProtKB/TrEMBL;Acc:F4K359]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.