Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51052 | Canola | cytosol | 98.41 | 98.8 |
| Bra020685.1-P | Field mustard | cytosol | 75.79 | 97.95 |
| AT5G48640.1 | Thale cress | cytosol | 90.87 | 90.51 |
| CDX85352 | Canola | cytosol | 87.7 | 87.7 |
| CDX86291 | Canola | cytosol | 87.7 | 87.7 |
| KRH46635 | Soybean | cytosol | 74.21 | 73.91 |
| KRG99632 | Soybean | cytosol | 74.21 | 73.91 |
| Solyc06g083260.2.1 | Tomato | cytosol, nucleus | 71.83 | 72.4 |
| PGSC0003DMT400051796 | Potato | cytosol | 71.83 | 72.4 |
| CDY51053 | Canola | cytosol | 71.83 | 71.54 |
| VIT_00s0360g00050.t01 | Wine grape | cytosol | 71.03 | 71.31 |
| CDY69301 | Canola | cytosol | 71.03 | 70.75 |
| Os09t0504400-01 | Rice | nucleus | 66.27 | 64.98 |
| EER97007 | Sorghum | nucleus | 65.87 | 64.59 |
| TraesCS5D01G289300.2 | Wheat | peroxisome | 65.48 | 63.95 |
| TraesCS5B01G281600.1 | Wheat | peroxisome | 65.48 | 63.95 |
| TraesCS6D01G332100.1 | Wheat | peroxisome | 64.68 | 63.42 |
| TraesCS5A01G282200.1 | Wheat | peroxisome | 64.68 | 63.18 |
| GSMUA_Achr7P02730_001 | Banana | cytosol | 65.87 | 63.12 |
| TraesCS6B01G382700.1 | Wheat | peroxisome | 64.29 | 63.03 |
| TraesCS6A01G349600.1 | Wheat | peroxisome | 64.29 | 63.03 |
| TraesCS5A01G057600.1 | Wheat | mitochondrion | 47.62 | 59.7 |
| HORVU6Hr1G083890.3 | Barley | plastid | 64.68 | 53.8 |
| Zm00001d021031_P002 | Maize | endoplasmic reticulum, vacuole | 65.48 | 52.38 |
| CDY05665 | Canola | endoplasmic reticulum, extracellular | 22.62 | 52.29 |
| CDX71123 | Canola | nucleus | 21.83 | 20.83 |
| CDX88692 | Canola | nucleus | 20.63 | 19.7 |
| CDY60279 | Canola | cytosol | 20.63 | 16.61 |
| CDY03933 | Canola | cytosol | 20.63 | 16.61 |
| CDY11776 | Canola | cytosol | 20.63 | 16.25 |
| CDX90099 | Canola | nucleus | 20.63 | 16.15 |
| CDY24526 | Canola | cytosol, nucleus, peroxisome | 18.65 | 14.87 |
| CDX99363 | Canola | nucleus | 23.02 | 14.39 |
| CDY54138 | Canola | cytosol | 17.86 | 14.24 |
| CDX78940 | Canola | nucleus | 22.62 | 14.07 |
| CDY26395 | Canola | nucleus | 25.4 | 12.17 |
| CDY51595 | Canola | nucleus | 19.05 | 11.62 |
| CDY03883 | Canola | nucleus | 19.05 | 11.51 |
| CDY65933 | Canola | nucleus | 25.4 | 11.27 |
| CDX76472 | Canola | nucleus | 23.41 | 11.15 |
| CDX82583 | Canola | nucleus | 25.0 | 11.11 |
| CDY09329 | Canola | nucleus | 23.41 | 11.11 |
| CDY39416 | Canola | nucleus | 25.0 | 10.88 |
| CDX99359 | Canola | nucleus | 22.62 | 10.67 |
| CDY27590 | Canola | cytosol | 15.48 | 6.27 |
| CDX84949 | Canola | cytosol | 5.56 | 3.99 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.3 | MapMan:15.3.3.4.4 | UniProt:A0A078JL30 | EnsemblPlants:CDY66082 | ProteinID:CDY66082 |
| ProteinID:CDY66082.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:CyclinC/Ssn8 | InterPro:Cyclin_N | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016538 | GO:GO:0016592 | GO:GO:0019538 |
| GO:GO:0030234 | GO:GO:0045859 | EnsemblPlantsGene:GSBRNA2T00051289001 | PFAM:PF00134 | PIRSF:PIRSF028758 | PANTHER:PTHR10026 |
| PANTHER:PTHR10026:SF7 | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI0004EEA42F | : | : |
Description
BnaCnng49540DBnaCnng49540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JL30]
Coordinates
chrLK035071:+:10525..12362
Molecular Weight (calculated)
29680.1 Da
IEP (calculated)
6.681
GRAVY (calculated)
-0.123
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MAANFWTSSH HKQLIEQEEV DVVHPLDKER GISVEDFKLI KFHMSNHMIK LAQHIKVRQR VVATAVTYMR RVYTRKSMVE FEPRLVALAC MYLASKAEES
101: IVQARNIIFY IRKLYPDEYK YELKDILGME MKVLEALNYY LVVFHPYRSL SEFLQDAAIN DVNMNQITWG IVNDTYKMDL ILVHPPYRIA LACIYIASVH
201: TEKDITAWFE DLHEDMNLVK NIAMEILDFY ENYRSITEEK VNSAFSKLAL KP
101: IVQARNIIFY IRKLYPDEYK YELKDILGME MKVLEALNYY LVVFHPYRSL SEFLQDAAIN DVNMNQITWG IVNDTYKMDL ILVHPPYRIA LACIYIASVH
201: TEKDITAWFE DLHEDMNLVK NIAMEILDFY ENYRSITEEK VNSAFSKLAL KP
001: MAANFWNSSH YKQLLDPEEV DVVHDLDKER GISIDDFKLI KFHMSNHIMK LAQHIKVRQR VVATAITYMR RVYIRKSMVE FEPRLVALTC LYLASKAEES
101: IVQARNLVFY IKRLYPDEYN KYELKDILGM EMKVLEALDY YLVVFHPYRS LSEFLQDAAL NDVNMNQITW GIVNDTYKMD LILVHPPYRI ALACIYIASV
201: HREKDITAWF EDLHEDMNLV KNIAMEILDF YENYRTITEE KVNSAFSKLA LKL
101: IVQARNLVFY IKRLYPDEYN KYELKDILGM EMKVLEALDY YLVVFHPYRS LSEFLQDAAL NDVNMNQITW GIVNDTYKMD LILVHPPYRI ALACIYIASV
201: HREKDITAWF EDLHEDMNLV KNIAMEILDF YENYRTITEE KVNSAFSKLA LKL
Arabidopsis Description
CYCC1-1Cyclin-C1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.