Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytoskeleton 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY51052 | Canola | cytosol | 97.95 | 76.1 |
CDY66082 | Canola | cytosol | 97.95 | 75.79 |
AT5G48640.1 | Thale cress | cytosol | 90.77 | 69.96 |
Bra037473.1-P | Field mustard | mitochondrion | 74.87 | 69.86 |
KRG99632 | Soybean | cytosol | 71.28 | 54.94 |
KRH46635 | Soybean | cytosol | 70.77 | 54.55 |
Bra020686.1-P | Field mustard | cytosol | 69.74 | 53.75 |
PGSC0003DMT400051796 | Potato | cytosol | 68.72 | 53.6 |
Solyc06g083260.2.1 | Tomato | cytosol, nucleus | 68.72 | 53.6 |
VIT_00s0360g00050.t01 | Wine grape | cytosol | 66.15 | 51.39 |
TraesCS5A01G057600.1 | Wheat | mitochondrion | 49.23 | 47.76 |
TraesCS5B01G281600.1 | Wheat | peroxisome | 62.56 | 47.29 |
TraesCS5D01G289300.2 | Wheat | peroxisome | 62.56 | 47.29 |
EER97007 | Sorghum | nucleus | 62.05 | 47.08 |
Os09t0504400-01 | Rice | nucleus | 62.05 | 47.08 |
TraesCS5A01G282200.1 | Wheat | peroxisome | 61.54 | 46.51 |
TraesCS6B01G382700.1 | Wheat | peroxisome | 61.03 | 46.3 |
TraesCS6D01G332100.1 | Wheat | peroxisome | 61.03 | 46.3 |
TraesCS6A01G349600.1 | Wheat | peroxisome | 60.51 | 45.91 |
GSMUA_Achr7P02730_001 | Banana | cytosol | 61.54 | 45.63 |
HORVU6Hr1G083890.3 | Barley | plastid | 61.54 | 39.6 |
Zm00001d021031_P002 | Maize | endoplasmic reticulum, vacuole | 62.05 | 38.41 |
Bra006723.1-P | Field mustard | nucleus | 22.56 | 16.67 |
Bra010927.1-P | Field mustard | nucleus | 20.51 | 12.5 |
Bra030056.1-P | Field mustard | cytosol | 20.0 | 12.46 |
Bra013402.1-P | Field mustard | nucleus | 24.1 | 11.6 |
Bra031514.1-P | Field mustard | cytosol | 16.92 | 10.44 |
Bra021950.1-P | Field mustard | nucleus | 25.64 | 8.94 |
Bra020954.1-P | Field mustard | nucleus | 24.1 | 8.92 |
Bra012508.1-P | Field mustard | nucleus | 18.46 | 8.72 |
Bra025087.1-P | Field mustard | nucleus | 25.13 | 8.64 |
Bra032800.1-P | Field mustard | cytosol | 16.41 | 5.14 |
Protein Annotations
Gene3D:1.10.472.10 | MapMan:13.1.1.1.3 | MapMan:15.3.3.4.4 | EnsemblPlantsGene:Bra020685 | EnsemblPlants:Bra020685.1 | EnsemblPlants:Bra020685.1-P |
InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:CyclinC/Ssn8 | InterPro:Cyclin_N | GO:GO:0003674 | GO:GO:0005575 |
GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006464 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016538 | GO:GO:0016592 | GO:GO:0019538 | GO:GO:0030234 |
GO:GO:0045859 | UniProt:M4DVZ1 | PFAM:PF00134 | PANTHER:PTHR10026 | PANTHER:PTHR10026:SF7 | SUPFAM:SSF47954 |
UniParc:UPI0002546329 | : | : | : | : | : |
Description
AT5G48640 (E=7e-063) | cyclin family protein
Coordinates
chrA02:-:23760673..23762223
Molecular Weight (calculated)
22696.5 Da
IEP (calculated)
5.294
GRAVY (calculated)
-0.067
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQEEVDVVH PLDKERGISV EDFKLIKFHM SNHMIKLAQH IKVRQRKSMV EFEPRLVALA CMYLASKAEE SIGMKVLEAL NYYLVVFHPY HSLSEFLQDA
101: AINDVNMNQI TWGIVNDTYT MDLILVHPPY RIALACIYIA SVHTEKDITA WFEDLHEDMN LVKNIAMEIL DFYENYRSIT EEKVNSAFSK LALKP
101: AINDVNMNQI TWGIVNDTYT MDLILVHPPY RIALACIYIA SVHTEKDITA WFEDLHEDMN LVKNIAMEIL DFYENYRSIT EEKVNSAFSK LALKP
001: MAANFWNSSH YKQLLDPEEV DVVHDLDKER GISIDDFKLI KFHMSNHIMK LAQHIKVRQR VVATAITYMR RVYIRKSMVE FEPRLVALTC LYLASKAEES
101: IVQARNLVFY IKRLYPDEYN KYELKDILGM EMKVLEALDY YLVVFHPYRS LSEFLQDAAL NDVNMNQITW GIVNDTYKMD LILVHPPYRI ALACIYIASV
201: HREKDITAWF EDLHEDMNLV KNIAMEILDF YENYRTITEE KVNSAFSKLA LKL
101: IVQARNLVFY IKRLYPDEYN KYELKDILGM EMKVLEALDY YLVVFHPYRS LSEFLQDAAL NDVNMNQITW GIVNDTYKMD LILVHPPYRI ALACIYIASV
201: HREKDITAWF EDLHEDMNLV KNIAMEILDF YENYRTITEE KVNSAFSKLA LKL
Arabidopsis Description
CYCC1-1Cyclin-C1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.