Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24526 | Canola | cytosol, nucleus, peroxisome | 96.84 | 96.84 |
| Zm00001d038497_P001 | Maize | cytosol, extracellular, peroxisome | 23.73 | 46.58 |
| Zm00001d027790_P001 | Maize | cytosol | 37.97 | 44.44 |
| Bra013402.1-P | Field mustard | nucleus | 54.75 | 42.72 |
| AT4G19560.1 | Thale cress | nucleus | 53.48 | 36.74 |
| Bra006723.1-P | Field mustard | nucleus | 29.11 | 34.85 |
| TraesCS4A01G199600.1 | Wheat | nucleus | 42.72 | 32.45 |
| TraesCS4B01G115800.1 | Wheat | nucleus | 42.41 | 32.21 |
| Bra030056.1-P | Field mustard | cytosol | 31.33 | 31.63 |
| Zm00001d020158_P001 | Maize | nucleus | 40.51 | 31.14 |
| TraesCS4D01G113400.1 | Wheat | nucleus | 42.72 | 30.41 |
| TraesCS4A01G199300.1 | Wheat | nucleus | 44.62 | 29.81 |
| TraesCS4B01G116000.1 | Wheat | nucleus | 44.62 | 29.44 |
| EES11326 | Sorghum | nucleus | 45.57 | 29.39 |
| TraesCS4D01G113600.1 | Wheat | nucleus | 44.62 | 29.38 |
| TraesCS2A01G323500.1 | Wheat | nucleus | 45.25 | 29.36 |
| HORVU4Hr1G021250.6 | Barley | nucleus | 44.3 | 29.23 |
| HORVU2Hr1G083340.2 | Barley | nucleus | 44.94 | 29.22 |
| Zm00001d026030_P014 | Maize | nucleus | 45.25 | 29.18 |
| TraesCS2B01G358600.1 | Wheat | nucleus | 44.94 | 29.16 |
| TraesCS2D01G339400.1 | Wheat | nucleus | 45.25 | 28.95 |
| Bra010927.1-P | Field mustard | nucleus | 29.11 | 28.75 |
| GSMUA_Achr6P04070_001 | Banana | nucleus | 43.67 | 28.4 |
| Bra020954.1-P | Field mustard | nucleus | 47.15 | 28.27 |
| HORVU4Hr1G021220.13 | Barley | cytosol | 39.24 | 28.18 |
| Bra021950.1-P | Field mustard | nucleus | 49.05 | 27.73 |
| EER88086 | Sorghum | nucleus | 41.14 | 27.31 |
| Bra025087.1-P | Field mustard | nucleus | 48.42 | 26.98 |
| TraesCS5A01G103900.2 | Wheat | nucleus | 44.3 | 26.62 |
| KRH50485 | Soybean | nucleus | 47.47 | 26.45 |
| KRG89442 | Soybean | nucleus | 47.47 | 26.41 |
| Os12t0485400-01 | Rice | nucleus | 45.25 | 26.34 |
| KRG89447 | Soybean | nucleus | 47.15 | 26.28 |
| Zm00001d027376_P002 | Maize | nucleus, plastid | 46.2 | 26.16 |
| HORVU5Hr1G038970.16 | Barley | nucleus | 44.94 | 26.05 |
| TraesCS5D01G121900.1 | Wheat | nucleus | 44.62 | 25.18 |
| VIT_00s0125g00270.t01 | Wine grape | nucleus | 45.57 | 24.57 |
| HORVU0Hr1G007890.2 | Barley | cytosol, nucleus | 29.43 | 24.41 |
| TraesCS5B01G112100.2 | Wheat | nucleus | 43.99 | 23.88 |
| KXG23456 | Sorghum | nucleus | 40.82 | 21.94 |
| OQU93178 | Sorghum | nucleus | 39.56 | 21.4 |
| Bra037473.1-P | Field mustard | mitochondrion | 12.97 | 19.62 |
| Bra020686.1-P | Field mustard | cytosol | 15.19 | 18.97 |
| Bra012508.1-P | Field mustard | nucleus | 22.15 | 16.95 |
| Bra020685.1-P | Field mustard | cytosol | 10.44 | 16.92 |
| Bra032800.1-P | Field mustard | cytosol | 17.41 | 8.84 |
Protein Annotations
| EnsemblPlants:Bra031514.1 | EnsemblPlants:Bra031514.1-P | EnsemblPlantsGene:Bra031514 | Gene3D:1.10.472.10 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_N | PANTHER:PTHR10026 | PANTHER:PTHR10026:SF103 | PFAM:PF00134 | SUPFAM:SSF47954 | UniParc:UPI0002544C7C |
| UniProt:M4ERT7 | MapMan:13.1.1.1.9 | : | : | : | : |
Description
AT4G19560 (E=6e-080) CYCT1;2 | CYCT1;2; cyclin-dependent protein kinase
Coordinates
chrA01:+:16821981..16823396
Molecular Weight (calculated)
35535.1 Da
IEP (calculated)
5.107
GRAVY (calculated)
-0.345
Length
316 amino acids
Sequence
(BLAST)
(BLAST)
001: MFPGEDRWYF SREEIDNDSP SRRDGIDLTE ETSLRKAYCS FLKDLGRRFK LDQVTVATAM VFCHRFFLLQ SHAKNDKWII AEVCMFLSAK VESTPVDLKT
101: LIITSEEILH KKVIAAEERQ GVYEHYKGIV LIGEKLVLST LNFDLSVDLP FDLLVQAMKK FILDTATQGT FPPAAWKFVK DSFWTTLCLQ YQPRHVAAGA
201: FFLAAMHIKM DAKSHGESWC QHFDITRRQL NDIRGQMGEL YYGKKPIPTF TGSIGETSNS GDVVQQQPVP TDNCPSSVIQ GGSSSVADGS LQDQSCPEGV
301: EKDSPDREAG DNQEES
101: LIITSEEILH KKVIAAEERQ GVYEHYKGIV LIGEKLVLST LNFDLSVDLP FDLLVQAMKK FILDTATQGT FPPAAWKFVK DSFWTTLCLQ YQPRHVAAGA
201: FFLAAMHIKM DAKSHGESWC QHFDITRRQL NDIRGQMGEL YYGKKPIPTF TGSIGETSNS GDVVQQQPVP TDNCPSSVIQ GGSSSVADGS LQDQSCPEGV
301: EKDSPDREAG DNQEES
001: MAETKNWYNT REAIEKTSPS RLDGINLKEE TFQRWSYTSF LQELGQRLNN PQKTIATAIV LCQRFFTRQS LTKNDPKTVA IICMFIAGKV EGSPRPAGDV
101: VFVSYRVLFN KEPLRDVFER LKMTVLTGEK LVLSTLECDL EIEHPYKLVM DWVKRSVKTE DGRRLCQAAF NFVNDSLRTS LCLQFGPSQI ASAAIYIGLS
201: MCKMTLPCDG DKAWWREFDV TKRQLWEICD QMLDLYVQDF VVPRHGL
101: VFVSYRVLFN KEPLRDVFER LKMTVLTGEK LVLSTLECDL EIEHPYKLVM DWVKRSVKTE DGRRLCQAAF NFVNDSLRTS LCLQFGPSQI ASAAIYIGLS
201: MCKMTLPCDG DKAWWREFDV TKRQLWEICD QMLDLYVQDF VVPRHGL
Arabidopsis Description
CYCT1-1Putative cyclin-T1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8P7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.