Factsheet for TraesCS2D01G339400.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G323500.1	Wheat	nucleus	97.57	98.97
TraesCS2B01G358600.1	Wheat	nucleus	96.96	98.36
HORVU2Hr1G083340.2	Barley	nucleus	95.34	96.91
Zm00001d038497_P001	Maize	cytosol, extracellular, peroxisome	29.76	91.3
EES11326	Sorghum	nucleus	85.02	85.71
TraesCS4D01G113600.1	Wheat	nucleus	82.79	85.21
Zm00001d026030_P014	Maize	nucleus	83.81	84.49
EER88086	Sorghum	nucleus	73.89	76.68
TraesCS4D01G113400.1	Wheat	nucleus	67.81	75.45
Zm00001d027376_P002	Maize	nucleus, plastid	82.59	73.12
GSMUA_Achr6P30140_001	Banana	nucleus	68.62	66.86
GSMUA_Achr6P31620_001	Banana	cytosol	62.55	60.23
TraesCS5D01G121900.1	Wheat	nucleus	64.98	57.32
VIT_19s0027g01670.t01	Wine grape	nucleus	67.0	53.13
KRH50485	Soybean	nucleus	60.93	53.09
KRG89442	Soybean	nucleus	60.93	52.99
VIT_00s0125g00270.t01	Wine grape	nucleus	62.55	52.73
AT1G35440.1	Thale cress	cytosol	26.11	52.23
KRG89447	Soybean	nucleus	59.92	52.2
CDY26395	Canola	nucleus	55.47	52.09
KRH13708	Soybean	nucleus	63.77	51.98
Bra020954.1-P	Field mustard	nucleus	54.86	51.42
KRH43745	Soybean	nucleus	63.36	51.23
CDX76472	Canola	nucleus	54.66	51.04
CDY09329	Canola	nucleus	54.86	51.04
AT4G19600.1	Thale cress	nucleus	55.87	51.02
CDX71123	Canola	nucleus	27.13	50.76
CDX99359	Canola	nucleus	54.45	50.37
Bra025087.1-P	Field mustard	nucleus	57.49	50.09
Solyc10g078180.1.1	Tomato	nucleus	62.55	49.76
CDX88692	Canola	nucleus	26.32	49.24
CDX82583	Canola	nucleus	56.48	49.21
Bra021950.1-P	Field mustard	nucleus	55.67	49.2
CDY39416	Canola	nucleus	57.49	49.05
Bra006723.1-P	Field mustard	nucleus	26.11	48.86
CDY65933	Canola	nucleus	55.67	48.42
AT5G45190.2	Thale cress	nucleus	57.69	48.31
CDX99363	Canola	nucleus	38.26	46.9
Bra013402.1-P	Field mustard	nucleus	37.85	46.17
CDX78940	Canola	nucleus	37.85	46.17
CDY24526	Canola	cytosol, nucleus, peroxisome	29.35	45.89
AT4G19560.1	Thale cress	nucleus	42.51	45.65
CDY54138	Canola	cytosol	28.95	45.25
Bra031514.1-P	Field mustard	cytosol	28.95	45.25
TraesCS3D01G199600.2	Wheat	nucleus	21.46	29.78
TraesCS6D01G332100.1	Wheat	peroxisome	13.36	25.68
TraesCS5D01G289300.2	Wheat	peroxisome	13.36	25.58
TraesCS6D01G310800.2	Wheat	nucleus	19.43	23.41
TraesCS6D01G087700.1	Wheat	nucleus	30.97	18.3

Protein Annotations

EnsemblPlants:TraesCS2D01G339400.1	EnsemblPlantsGene:TraesCS2D01G339400	Gene3D:1.10.472.10	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_N
PANTHER:PTHR10026	PANTHER:PTHR10026:SF103	PFAM:PF00134	PIRSF:PIRSF036580	SEG:seg	SMART:SM00385
SUPFAM:SSF47954	TIGR:cd00043	MapMan:13.1.1.1.9	MapMan:15.3.2.1.2	:	:

Description

No Description!

Coordinates

chr2D:+:433503068..433508903

Molecular Weight (calculated)

56544.6 Da

IEP (calculated)

7.570

GRAVY (calculated)

-0.916

Length

494 amino acids

Sequence
(BLAST)

001: MDIMQTSDSS HHGIVENSPY TTPYDRRVEG DQLGASWYFS RKEIEENSLS RRDGIDLKKE SYLRKSYCTF LQDFGMRLKV PQVTIATAIV FCHRFFLRQS
101: HAKNDRQTIA TVCMFLAGKV EETPRPLKDV VLISYEIIHK KDPAAVARIK QKEVYEQQKE VYEQQKELLL IGERLVLVTL GFDMNVHHPY KPLVEAIKKF
201: KVAQNALAQV AWNFVNDGLR TSLCLQFKPH HIAAGAIFLA AKFLKVKLPA DGEKVWWQEF DVTPRQLEEV SNQMLELYEQ NRVGPPPSQG NDTEGSSASV
301: VNQRAPVKTE EPPAHETHQA PRQSSVPGRH GHDHPQPEKQ NSNQRIPKSE ARDGTTNSNE GTNMSSSMMD AMKKIDKDKV KAALEKRRKS KGDAGRKVDV
401: MDDDDLIERE LEHGVELAAE DEKKHDRRQS WPHPAHREDH QNTACKAENT EEGELSLDGQ EYRSPGPDNR KRKDVHEHRS NDRSAERDIK RLRP

Best Arabidopsis Sequence Match ( AT4G19560.1 )
(BLAST)

001: MDEALNENAS GSESDASSVA SNLHDDEIIP WFFSREEIER NSPSRRDGID LKTETRLRDS YCTFLEILGE RLKVPQVTIA TAIFFCHRFF LRQSHAKNDR
101: QTIATVCMLL AGKVEETPVT LEDVIIASYE RIHKKDLAGA QRKEVYDQQK ELVLIGEELV LSTLNFDLCI SHPYKPLVEA IKKYMVEDAK TQLAQFAWNF
201: VNDCLRTTLC LQYQPHHIAA GAILLAAELP TVDLQSYREV LCQEFDITPC QLEDIRGQIL ELYERIPTSQ ESKVESSGGV AVVHQPISRD MASTEKCPSS
301: DIEGGSSQVN LSQSDDHSVH DGSRSEGIGE VNSESEAQKN LQDHSVGNIM VEKSDDVGVV QLKKDLQLHQ EEVESKQEKD KKSFEKDITK IDLMDEKDLT
401: ESEVEDEINK TMQTGRQIFM KVEDPDDNMT VEHSEIRNAN NSGVDDELVA DTCLINDSDL

Arabidopsis Description

CYCT1-2Cyclin-T1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q56YF8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.