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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G199600.1 Wheat nucleus 84.68 90.38
TraesCS4B01G115800.1 Wheat nucleus 84.23 89.9
Zm00001d038497_P001 Maize cytosol, extracellular, peroxisome 29.5 81.37
TraesCS2D01G339400.1 Wheat nucleus 75.45 67.81
TraesCS4D01G113600.1 Wheat nucleus 73.2 67.71
EES11326 Sorghum nucleus 72.75 65.92
Zm00001d026030_P014 Maize nucleus 71.62 64.9
HORVU4Hr1G021220.13 Barley cytosol 59.23 59.77
EER88086 Sorghum nucleus 63.29 59.03
Zm00001d027376_P002 Maize nucleus, plastid 70.5 56.09
GSMUA_Achr6P30140_001 Banana nucleus 61.04 53.45
GSMUA_Achr6P31620_001 Banana cytosol 56.76 49.12
AT1G35440.1 Thale cress cytosol 27.25 48.99
TraesCS5D01G121900.1 Wheat nucleus 59.46 47.14
CDX71123 Canola nucleus 27.93 46.97
CDX88692 Canola nucleus 27.03 45.45
Bra006723.1-P Field mustard nucleus 26.8 45.08
CDY26395 Canola nucleus 52.7 44.49
KRH50485 Soybean nucleus 56.53 44.27
KRG89442 Soybean nucleus 56.53 44.19
VIT_19s0027g01670.t01 Wine grape nucleus 61.94 44.14
KRG89447 Soybean nucleus 55.63 43.56
Bra020954.1-P Field mustard nucleus 51.58 43.45
AT4G19600.1 Thale cress nucleus 52.93 43.44
CDY24526 Canola cytosol, nucleus, peroxisome 30.86 43.35
VIT_00s0125g00270.t01 Wine grape nucleus 57.21 43.34
CDY09329 Canola nucleus 51.35 42.94
CDX76472 Canola nucleus 51.13 42.91
CDY54138 Canola cytosol 30.41 42.72
Bra031514.1-P Field mustard cytosol 30.41 42.72
CDX78940 Canola nucleus 38.96 42.72
Bra013402.1-P Field mustard nucleus 38.96 42.72
Bra025087.1-P Field mustard nucleus 54.5 42.68
CDX99359 Canola nucleus 50.9 42.32
CDX99363 Canola nucleus 38.29 42.18
Bra021950.1-P Field mustard nucleus 52.93 42.04
CDX82583 Canola nucleus 53.38 41.8
CDY39416 Canola nucleus 54.5 41.8
KRH43745 Soybean nucleus 57.43 41.73
KRH13708 Soybean nucleus 56.76 41.58
CDY65933 Canola nucleus 52.93 41.37
AT5G45190.2 Thale cress nucleus 54.28 40.85
Solyc10g078180.1.1 Tomato nucleus 56.76 40.58
AT4G19560.1 Thale cress nucleus 40.99 39.57
TraesCS3D01G199600.2 Wheat nucleus 23.42 29.21
TraesCS6D01G332100.1 Wheat peroxisome 13.96 24.12
TraesCS5D01G289300.2 Wheat peroxisome 13.51 23.26
TraesCS6D01G310800.2 Wheat nucleus 20.72 22.44
TraesCS6D01G087700.1 Wheat nucleus 31.31 16.63
Protein Annotations
EnsemblPlants:TraesCS4D01G113400.1EnsemblPlantsGene:TraesCS4D01G113400Gene3D:1.10.472.10InterPro:Cyclin-likeInterPro:Cyclin-like_sfInterPro:Cyclin_N
PANTHER:PTHR10026PANTHER:PTHR10026:SF103PFAM:PF00134PIRSF:PIRSF036580SEG:segSMART:SM00385
SUPFAM:SSF47954TIGR:cd00043MapMan:13.1.1.1.9MapMan:15.3.2.1.2::
Description
No Description!
Coordinates
chr4D:-:93843948..93848079
Molecular Weight (calculated)
50307.5 Da
IEP (calculated)
7.374
GRAVY (calculated)
-0.735
Length
444 amino acids
Sequence
(BLAST)
001: MDIMQTSDSS QYGVVENSPY RFPYNKRVED GNLGASWYFS RKEIEENSLS RRDGISLKKE SFLRKSYCTF LQDLGVRLKV PPVTIATAIV FCHRFFLRQS
101: HAKNDRLTVA TVCMFLAGKV EETPIPLKDV ILISYEIIHK KDPGAVARIK QKEVYEQQKK LLLIGERAVL ITLDFDFNVH HPYKPLVEAI KKLKIAQKEL
201: AQVAWSFVND GLCTSLCLQF KPQHIAAGAI FLAAKFLKVK LPADGEKVWW QDFDVTPWQL EEVSNQMMEL YGPPPSQGNN TKSSSASLAD QHAAEKAPGA
301: AEEPPAHKNH PASRQSSLPD HHHPERQNSN QRIVQTETRD GTATSNEGPT MPPSGMDAVE KIADLSEREL KHGVELVAED DEKHDRRQTV PRPPHREDHQ
401: KAAHTTEGTE EGEPSKDSQE CHSKRKEHRS HDHSSERDLK RLRP
Best Arabidopsis Sequence Match ( AT4G19560.1 )
(BLAST)
001: MDEALNENAS GSESDASSVA SNLHDDEIIP WFFSREEIER NSPSRRDGID LKTETRLRDS YCTFLEILGE RLKVPQVTIA TAIFFCHRFF LRQSHAKNDR
101: QTIATVCMLL AGKVEETPVT LEDVIIASYE RIHKKDLAGA QRKEVYDQQK ELVLIGEELV LSTLNFDLCI SHPYKPLVEA IKKYMVEDAK TQLAQFAWNF
201: VNDCLRTTLC LQYQPHHIAA GAILLAAELP TVDLQSYREV LCQEFDITPC QLEDIRGQIL ELYERIPTSQ ESKVESSGGV AVVHQPISRD MASTEKCPSS
301: DIEGGSSQVN LSQSDDHSVH DGSRSEGIGE VNSESEAQKN LQDHSVGNIM VEKSDDVGVV QLKKDLQLHQ EEVESKQEKD KKSFEKDITK IDLMDEKDLT
401: ESEVEDEINK TMQTGRQIFM KVEDPDDNMT VEHSEIRNAN NSGVDDELVA DTCLINDSDL
Arabidopsis Description
CYCT1-2Cyclin-T1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q56YF8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.