CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038497_P001	Maize	cytosol, extracellular, peroxisome	31.63	96.27
Zm00001d026030_P014	Maize	nucleus	93.88	93.88
TraesCS2B01G358600.1	Wheat	nucleus	85.71	86.24
TraesCS2A01G323500.1	Wheat	nucleus	85.71	86.24
HORVU2Hr1G083340.2	Barley	nucleus	84.49	85.19
TraesCS2D01G339400.1	Wheat	nucleus	85.71	85.02
TraesCS4A01G199300.1	Wheat	nucleus	81.84	84.78
TraesCS4D01G113600.1	Wheat	nucleus	82.04	83.75
TraesCS4B01G116000.1	Wheat	nucleus	81.63	83.51
HORVU4Hr1G021250.6	Barley	nucleus	81.43	83.3
Zm00001d027376_P002	Maize	nucleus, plastid	93.47	82.08
HORVU0Hr1G007890.2	Barley	cytosol, nucleus	62.45	80.31
EER88086	Sorghum	nucleus	76.53	78.78
TraesCS4A01G199600.1	Wheat	nucleus	61.84	72.84
TraesCS4D01G113400.1	Wheat	nucleus	65.92	72.75
TraesCS4B01G115800.1	Wheat	nucleus	61.63	72.6
GSMUA_Achr6P30140_001	Banana	nucleus	71.02	68.64
GSMUA_Achr6P31620_001	Banana	cytosol	63.27	60.43
KRH50485	Soybean	nucleus	63.47	54.85
KRG89442	Soybean	nucleus	63.06	54.4
VIT_19s0027g01670.t01	Wine grape	nucleus	68.98	54.25
CDY26395	Canola	nucleus	57.96	53.99
KRG89447	Soybean	nucleus	62.04	53.62
VIT_00s0125g00270.t01	Wine grape	nucleus	64.08	53.58
AT4G19600.1	Thale cress	nucleus	58.37	52.87
Bra020954.1-P	Field mustard	nucleus	56.73	52.75
CDY09329	Canola	nucleus	57.14	52.73
HORVU4Hr1G021220.13	Barley	cytosol	47.35	52.73
CDX99359	Canola	nucleus	57.35	52.62
CDX76472	Canola	nucleus	56.73	52.55
KRH13708	Soybean	nucleus	64.69	52.31
AT1G35440.1	Thale cress	cytosol	26.33	52.23
KRH43745	Soybean	nucleus	65.1	52.21
Bra025087.1-P	Field mustard	nucleus	60.0	51.85
OQU93178	Sorghum	nucleus	61.63	51.71
Solyc10g078180.1.1	Tomato	nucleus	65.1	51.37
CDX71123	Canola	nucleus	27.55	51.14
Bra021950.1-P	Field mustard	nucleus	57.96	50.8
CDX82583	Canola	nucleus	58.78	50.79
CDY39416	Canola	nucleus	60.0	50.78
CDY65933	Canola	nucleus	57.76	49.82
AT5G45190.2	Thale cress	nucleus	59.8	49.66
CDX88692	Canola	nucleus	26.53	49.24
Bra006723.1-P	Field mustard	nucleus	26.33	48.86
KXG23456	Sorghum	nucleus	56.73	47.28
CDX99363	Canola	nucleus	38.37	46.65
CDX78940	Canola	nucleus	38.37	46.42
Bra013402.1-P	Field mustard	nucleus	38.37	46.42
CDY24526	Canola	cytosol, nucleus, peroxisome	29.8	46.2
CDY54138	Canola	cytosol	29.59	45.89
Bra031514.1-P	Field mustard	cytosol	29.39	45.57
AT4G19560.1	Thale cress	nucleus	42.65	45.43
EER97007	Sorghum	nucleus	13.88	26.46
KXG29406	Sorghum	cytosol	28.98	25.68
OQU86869	Sorghum	cytosol, nucleus, plastid	16.12	24.84
EES07541	Sorghum	plastid	33.06	23.24
KXG30252	Sorghum	nucleus	14.9	22.6

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.9	MapMan:15.3.2.1.2	EntrezGene:8071073	UniProt:C5YEN1	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:Cyclin_N	EnsemblPlants:EES11326	ProteinID:EES11326	ProteinID:EES11326.1	GO:GO:0000307
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006464	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016538	GO:GO:0019538	GO:GO:0019901	GO:GO:0030234
GO:GO:0045737	GO:GO:0045944	GO:GO:1901409	PFAM:PF00134	PIRSF:PIRSF036580	PANTHER:PTHR10026
PANTHER:PTHR10026:SF103	SMART:SM00385	EnsemblPlantsGene:SORBI_3006G194400	SUPFAM:SSF47954	unigene:Sbi.3601	UniParc:UPI0001A86DBE
RefSeq:XP_002446998.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:54760888..54768413

Molecular Weight (calculated)

56265.3 Da

IEP (calculated)

7.622

GRAVY (calculated)

-0.921

Length

490 amino acids

Sequence
(BLAST)

001: MDIMQTSDSS HHGIVENSPY RIPYDRHAEG GQLGASWYFS RKEIEENSLS RRDGIDLKKE SYLRKSYCTF LQDLGMRLKV PQVTIATAIV FCHRFFLRQS
101: HAKNDRRTIA TVCMFLAGKV EETPRPLKDV ILLSYEIIHK KDPAAVQRIK QKEVYEQQKE LILLGERVVL VTLGFDLNVN HPYKPLVEAI KKFKVAQNAL
201: AQVAWNFVND GLRTSLCLQF KPHHIAAGAI FLAAKFLKVK LPSDGDKVWW QEFDVTPRQL EEVSNQMLEL YEQNRVQPTP PQGNDTEGSS ASVANQRASG
301: KVPGVADEPP AHEHNQAPRQ SSQQNMSGHH GYDHPHPEKQ NYRMPPNEAR DGTANSNEGP NVSSSMMDAM KKINKDKVKA ALEKRRKSKG DLSRKADVMD
401: DDDLIERELE HGVELAVEDE KIKQERRQGW PHPAHRVDHQ STNRENTEEG ELSMDSQEYH SPEHDNRKRK DAHEHRNYDR DERDLKRLRS

Best Arabidopsis Sequence Match ( AT5G45190.1 )
(BLAST)

001: MAGVLAGECS YSESGVSSHS RNSHEKQEEV SRWYFGRKEI EENSPSRLDG IDLKKETYLR KSYCTFLQDL GMRLKVPQVT IATAIIFCHR FFFRQSHAKN
101: DRRTIATVCM FLAGKVEETP RPLKDVIFVS YEIINKKDPG ASQKIKQKEV YEQQKELILN GEKIVLSTLG FDLNVYHPYK PLVEAIKKFK VAQNALAQVA
201: WNFVNDGLRT SLCLQFKPHH IAAGAIFLAA KFLKVKLPSD GEKVWWQEFD VTPRQLEDVS NQMLELYEQN RVPASQGSEV ESSVGGGSAQ RPGSRNAVST
301: DEHVGSRQTS SVRSTHEQSN SDNHGGSSKG VLNQNNENGG GEAANVSVDN KEEIERETKE SSLHLESHPA HKDNVREAPH NSRPLVEGPG KDNSEREGGE
401: LQDDGAVHKS RNVDVGDALI SQSPKDLKLL RDKVKAKREK AKKLLGERTR KKDLMDEDDL IERELEDVQL AVEDEKTKER KVQSRPKAEN SDLMGTEHGE
501: ILDVKGEVKN TEEGEMVNNN VSPMMHSRKR KMGSPPEKQS EGKRRHNSEN GEESHKTSRG SSHHGDREHR RHSQENNHS

Arabidopsis Description

Cyclin family protein [Source:UniProtKB/TrEMBL;Acc:F4KD43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.