Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG89447 | Soybean | nucleus | 97.54 | 97.71 |
| KRH50485 | Soybean | nucleus | 95.95 | 96.12 |
| Zm00001d038497_P001 | Maize | cytosol, extracellular, peroxisome | 25.7 | 90.68 |
| Zm00001d027790_P001 | Maize | cytosol | 34.15 | 71.85 |
| TraesCS4A01G199300.1 | Wheat | nucleus | 52.64 | 63.21 |
| TraesCS4D01G113600.1 | Wheat | nucleus | 53.35 | 63.12 |
| EES11326 | Sorghum | nucleus | 54.4 | 63.06 |
| HORVU4Hr1G021250.6 | Barley | nucleus | 52.64 | 62.42 |
| TraesCS4B01G116000.1 | Wheat | nucleus | 52.46 | 62.21 |
| TraesCS2B01G358600.1 | Wheat | nucleus | 52.99 | 61.81 |
| HORVU2Hr1G083340.2 | Barley | nucleus | 52.82 | 61.73 |
| Zm00001d026030_P014 | Maize | nucleus | 53.17 | 61.63 |
| TraesCS2A01G323500.1 | Wheat | nucleus | 52.82 | 61.6 |
| HORVU0Hr1G007890.2 | Barley | cytosol, nucleus | 41.02 | 61.15 |
| TraesCS2D01G339400.1 | Wheat | nucleus | 52.99 | 60.93 |
| Zm00001d020158_P001 | Maize | nucleus | 43.84 | 60.58 |
| CDY26395 | Canola | nucleus | 55.11 | 59.51 |
| Bra020954.1-P | Field mustard | nucleus | 54.93 | 59.2 |
| EER88086 | Sorghum | nucleus | 49.3 | 58.82 |
| CDX76472 | Canola | nucleus | 54.75 | 58.79 |
| VIT_00s0125g00270.t01 | Wine grape | nucleus | 60.39 | 58.53 |
| CDY09329 | Canola | nucleus | 54.58 | 58.38 |
| AT4G19600.1 | Thale cress | nucleus | 54.75 | 57.49 |
| TraesCS4A01G199600.1 | Wheat | nucleus | 41.9 | 57.21 |
| TraesCS4B01G115800.1 | Wheat | nucleus | 41.73 | 56.97 |
| Os12t0485400-01 | Rice | nucleus | 54.4 | 56.91 |
| CDX99359 | Canola | nucleus | 53.17 | 56.55 |
| TraesCS4D01G113400.1 | Wheat | nucleus | 44.19 | 56.53 |
| KRH43745 | Soybean | nucleus | 60.56 | 56.3 |
| Bra021950.1-P | Field mustard | nucleus | 55.28 | 56.17 |
| KRH13708 | Soybean | nucleus | 59.68 | 55.94 |
| CDY65933 | Canola | nucleus | 55.63 | 55.63 |
| Bra025087.1-P | Field mustard | nucleus | 55.46 | 55.56 |
| CDX82583 | Canola | nucleus | 55.11 | 55.2 |
| Zm00001d027376_P002 | Maize | nucleus, plastid | 53.7 | 54.66 |
| TraesCS5A01G103900.2 | Wheat | nucleus | 50.53 | 54.56 |
| AT5G45190.2 | Thale cress | nucleus | 56.34 | 54.24 |
| CDY39416 | Canola | nucleus | 55.28 | 54.23 |
| HORVU5Hr1G038970.16 | Barley | nucleus | 51.58 | 53.76 |
| GSMUA_Achr6P04070_001 | Banana | nucleus | 45.6 | 53.29 |
| TraesCS5D01G121900.1 | Wheat | nucleus | 52.46 | 53.21 |
| AT1G35440.1 | Thale cress | cytosol | 22.71 | 52.23 |
| TraesCS5B01G112100.2 | Wheat | nucleus | 52.99 | 51.72 |
| CDX71123 | Canola | nucleus | 23.59 | 50.76 |
| CDX78940 | Canola | nucleus | 35.39 | 49.63 |
| Bra013402.1-P | Field mustard | nucleus | 35.39 | 49.63 |
| CDX99363 | Canola | nucleus | 35.21 | 49.63 |
| CDX88692 | Canola | nucleus | 23.06 | 49.62 |
| Bra006723.1-P | Field mustard | nucleus | 22.89 | 49.24 |
| CDY24526 | Canola | cytosol, nucleus, peroxisome | 26.58 | 47.78 |
| CDY54138 | Canola | cytosol | 26.41 | 47.47 |
| Bra031514.1-P | Field mustard | cytosol | 26.41 | 47.47 |
| AT4G19560.1 | Thale cress | nucleus | 38.03 | 46.96 |
| OQU93178 | Sorghum | nucleus | 46.83 | 45.55 |
| HORVU4Hr1G021220.13 | Barley | cytosol | 35.21 | 45.45 |
| KXG23456 | Sorghum | nucleus | 45.25 | 43.71 |
| KRG91263 | Soybean | nucleus | 22.71 | 34.4 |
| KRH35545 | Soybean | nucleus | 22.36 | 34.14 |
| KRH27619 | Soybean | cytosol | 20.77 | 31.72 |
| KRH46635 | Soybean | cytosol | 11.27 | 25.3 |
| KRG99632 | Soybean | cytosol | 11.27 | 25.3 |
| KRG92800 | Soybean | nucleus | 19.72 | 25.28 |
| KRH33999 | Soybean | nucleus | 19.89 | 25.22 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100780279 | MapMan:13.1.1.1.9 | MapMan:15.3.2.1.2 | EMBL:ACUP02012208 | ncoils:Coil |
| InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_N | EnsemblPlantsGene:GLYMA_20G023500 | GO:GO:0000307 | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006464 |
| GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016538 |
| GO:GO:0019538 | GO:GO:0030234 | GO:GO:0045737 | GO:GO:0045944 | GO:GO:1901409 | UniProt:I1NDG6 |
| EnsemblPlants:KRG89442 | ProteinID:KRG89442 | ProteinID:KRG89442.1 | ProteinID:KRG89443.1 | PFAM:PF00134 | PIRSF:PIRSF036580 |
| PANTHER:PTHR10026 | PANTHER:PTHR10026:SF103 | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI000233DD76 | SEG:seg |
Description
hypothetical protein
Coordinates
chr20:-:2502244..2508792
Molecular Weight (calculated)
64257.5 Da
IEP (calculated)
6.566
GRAVY (calculated)
-0.960
Length
568 amino acids
Sequence
(BLAST)
(BLAST)
001: MTGLMPGELP HHGTPDGNSG KSSQDKQEES LGRWYMSRKE IEEHSPSRKD GIDLKKETYL RKSYCTFLQD LGMRLKVPQV TIATAIIFCH RFFLRQSHAK
101: NDRRTIATVC MFLAGKVEET PRPLKDVILV SYEIIHKKDP AAAQRIKQKE VYEQQKELIL LGERVVLATL GFDLNVQHPY KPLVEAIKKF NVAKNALAQV
201: AWNFVNDGLR TSLCLQFKPH HIAAGAIFLA AKFLKVKLPS DGEKVWWQEF DVTPRQLEEV SNQMLELYEQ NRLPPAQGSE VEGSAGGTRA ASKAPSANEE
301: QASKQISSQA PQHSSVERTA VPQRGTENQS NDGSAEMGSD ITDHNLDIRE SHNSEQLTHQ DNKREVSNRS KSGTERDQDR IVGTKEGAEV GRRDESALNN
401: SGSNVGRNLE RREVPLGHSP NEAIKIDKDK LKALAAMGKK RKEQRGEMAL KKDVMDEDDL IERELEDGIE LAVEDEKNKR ERRQNWSKPD GEDHHGGENH
501: EETRDGRYMN MKVQFQKDMD EDNAEEGEMI DDASSSLNNR KRRMGSPPGR QPEMKKHLDS SYHNDLAE
101: NDRRTIATVC MFLAGKVEET PRPLKDVILV SYEIIHKKDP AAAQRIKQKE VYEQQKELIL LGERVVLATL GFDLNVQHPY KPLVEAIKKF NVAKNALAQV
201: AWNFVNDGLR TSLCLQFKPH HIAAGAIFLA AKFLKVKLPS DGEKVWWQEF DVTPRQLEEV SNQMLELYEQ NRLPPAQGSE VEGSAGGTRA ASKAPSANEE
301: QASKQISSQA PQHSSVERTA VPQRGTENQS NDGSAEMGSD ITDHNLDIRE SHNSEQLTHQ DNKREVSNRS KSGTERDQDR IVGTKEGAEV GRRDESALNN
401: SGSNVGRNLE RREVPLGHSP NEAIKIDKDK LKALAAMGKK RKEQRGEMAL KKDVMDEDDL IERELEDGIE LAVEDEKNKR ERRQNWSKPD GEDHHGGENH
501: EETRDGRYMN MKVQFQKDMD EDNAEEGEMI DDASSSLNNR KRRMGSPPGR QPEMKKHLDS SYHNDLAE
001: MAGVLAGECS YSESGVSSHS RNSHEKQEEV SRWYFGRKEI EENSPSRLDG IDLKKETYLR KSYCTFLQDL GMRLKVPQVT IATAIIFCHR FFFRQSHAKN
101: DRRTIATVCM FLAGKVEETP RPLKDVIFVS YEIINKKDPG ASQKIKQKEV YEQQKELILN GEKIVLSTLG FDLNVYHPYK PLVEAIKKFK VAQNALAQVA
201: WNFVNDGLRT SLCLQFKPHH IAAGAIFLAA KFLKVKLPSD GEKVWWQEFD VTPRQLEDVS NQMLELYEQN RVPASQGSEV ESSVGGGSAQ RPGSRNAVST
301: DEHVGSRQTS SVRSTHEQSN SDNHGGSSKG VLNQNNENGG GEAANVSVDN KEEIERETKE SSLHLESHPA HKDNVREAPH NSRPLVEGPG KDNSEREGGE
401: LQDDGAVHKS RNVDVGDALI SQSPKDLKLL RDKVKAKREK AKKLLGERTR KKDLMDEDDL IERELEDVQL AVEDEKTKER KVQSRPKAEN SDLMGTEHGE
501: ILDVKGEVKN TEEGEMVNNN VSPMMHSRKR KMGSPPEKQS EGKRRHNSEN GEESHKTSRG SSHHGDREHR RHSQENNHS
101: DRRTIATVCM FLAGKVEETP RPLKDVIFVS YEIINKKDPG ASQKIKQKEV YEQQKELILN GEKIVLSTLG FDLNVYHPYK PLVEAIKKFK VAQNALAQVA
201: WNFVNDGLRT SLCLQFKPHH IAAGAIFLAA KFLKVKLPSD GEKVWWQEFD VTPRQLEDVS NQMLELYEQN RVPASQGSEV ESSVGGGSAQ RPGSRNAVST
301: DEHVGSRQTS SVRSTHEQSN SDNHGGSSKG VLNQNNENGG GEAANVSVDN KEEIERETKE SSLHLESHPA HKDNVREAPH NSRPLVEGPG KDNSEREGGE
401: LQDDGAVHKS RNVDVGDALI SQSPKDLKLL RDKVKAKREK AKKLLGERTR KKDLMDEDDL IERELEDVQL AVEDEKTKER KVQSRPKAEN SDLMGTEHGE
501: ILDVKGEVKN TEEGEMVNNN VSPMMHSRKR KMGSPPEKQS EGKRRHNSEN GEESHKTSRG SSHHGDREHR RHSQENNHS
Arabidopsis Description
Cyclin family protein [Source:UniProtKB/TrEMBL;Acc:F4KD43]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.