Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038497_P001 | Maize | cytosol, extracellular, peroxisome | 24.23 | 88.2 |
| Zm00001d027790_P001 | Maize | cytosol | 31.74 | 68.89 |
| EES11326 | Sorghum | nucleus | 53.58 | 64.08 |
| HORVU4Hr1G021250.6 | Barley | nucleus | 52.22 | 63.88 |
| HORVU2Hr1G083340.2 | Barley | nucleus | 52.9 | 63.79 |
| TraesCS2B01G358600.1 | Wheat | nucleus | 52.9 | 63.66 |
| TraesCS4A01G199300.1 | Wheat | nucleus | 51.37 | 63.64 |
| TraesCS2A01G323500.1 | Wheat | nucleus | 52.56 | 63.24 |
| Zm00001d026030_P014 | Maize | nucleus | 52.73 | 63.06 |
| TraesCS4B01G116000.1 | Wheat | nucleus | 51.54 | 63.05 |
| HORVU0Hr1G007890.2 | Barley | cytosol, nucleus | 40.78 | 62.73 |
| TraesCS4D01G113600.1 | Wheat | nucleus | 51.37 | 62.71 |
| TraesCS2D01G339400.1 | Wheat | nucleus | 52.73 | 62.55 |
| VIT_19s0027g01670.t01 | Wine grape | nucleus | 64.68 | 60.83 |
| KRH50485 | Soybean | nucleus | 58.7 | 60.67 |
| KRG89442 | Soybean | nucleus | 58.53 | 60.39 |
| KRG89447 | Soybean | nucleus | 57.85 | 59.79 |
| EER88086 | Sorghum | nucleus | 48.46 | 59.66 |
| CDY26395 | Canola | nucleus | 52.73 | 58.75 |
| Bra020954.1-P | Field mustard | nucleus | 52.39 | 58.25 |
| CDY09329 | Canola | nucleus | 52.73 | 58.19 |
| CDX76472 | Canola | nucleus | 52.39 | 58.03 |
| TraesCS4A01G199600.1 | Wheat | nucleus | 41.13 | 57.93 |
| TraesCS4B01G115800.1 | Wheat | nucleus | 41.13 | 57.93 |
| AT4G19600.1 | Thale cress | nucleus | 53.41 | 57.86 |
| TraesCS4D01G113400.1 | Wheat | nucleus | 43.34 | 57.21 |
| Zm00001d020158_P001 | Maize | nucleus | 39.93 | 56.93 |
| CDX99359 | Canola | nucleus | 51.19 | 56.18 |
| Bra021950.1-P | Field mustard | nucleus | 53.07 | 55.64 |
| Bra025087.1-P | Field mustard | nucleus | 53.41 | 55.2 |
| Zm00001d027376_P002 | Maize | nucleus, plastid | 52.56 | 55.2 |
| Os12t0485400-01 | Rice | nucleus | 51.02 | 55.06 |
| CDY65933 | Canola | nucleus | 53.24 | 54.93 |
| CDX82583 | Canola | nucleus | 52.9 | 54.67 |
| AT5G45190.2 | Thale cress | nucleus | 54.61 | 54.24 |
| TraesCS5A01G103900.2 | Wheat | nucleus | 48.63 | 54.18 |
| CDY39416 | Canola | nucleus | 53.41 | 54.06 |
| HORVU5Hr1G038970.16 | Barley | nucleus | 50.0 | 53.76 |
| TraesCS5D01G121900.1 | Wheat | nucleus | 51.02 | 53.39 |
| AT1G35440.1 | Thale cress | cytosol | 22.18 | 52.63 |
| GSMUA_Achr6P04070_001 | Banana | nucleus | 43.17 | 52.06 |
| TraesCS5B01G112100.2 | Wheat | nucleus | 51.02 | 51.37 |
| CDX71123 | Canola | nucleus | 22.87 | 50.76 |
| Bra006723.1-P | Field mustard | nucleus | 22.01 | 48.86 |
| CDX88692 | Canola | nucleus | 22.01 | 48.86 |
| CDX99363 | Canola | nucleus | 32.94 | 47.89 |
| CDX78940 | Canola | nucleus | 32.59 | 47.16 |
| Bra013402.1-P | Field mustard | nucleus | 32.59 | 47.16 |
| HORVU4Hr1G021220.13 | Barley | cytosol | 34.81 | 46.36 |
| CDY24526 | Canola | cytosol, nucleus, peroxisome | 24.74 | 45.89 |
| CDY54138 | Canola | cytosol | 24.57 | 45.57 |
| Bra031514.1-P | Field mustard | cytosol | 24.57 | 45.57 |
| AT4G19560.1 | Thale cress | nucleus | 35.67 | 45.43 |
| OQU93178 | Sorghum | nucleus | 45.05 | 45.21 |
| KXG23456 | Sorghum | nucleus | 42.32 | 42.18 |
| VIT_18s0001g12980.t01 | Wine grape | nucleus | 30.38 | 40.27 |
| VIT_05s0020g03070.t01 | Wine grape | endoplasmic reticulum, extracellular | 5.97 | 39.77 |
| VIT_05s0020g03060.t01 | Wine grape | nucleus | 15.36 | 28.57 |
| VIT_00s0360g00050.t01 | Wine grape | cytosol | 10.41 | 24.3 |
| VIT_17s0053g01060.t01 | Wine grape | cytosol | 3.92 | 21.9 |
| VIT_12s0028g00110.t01 | Wine grape | nucleus | 18.43 | 19.82 |
Protein Annotations
| Gene3D:1.10.472.10 | EntrezGene:100256429 | wikigene:100256429 | MapMan:13.1.1.1.9 | EMBL:AM444303 | ProteinID:CAN76344 |
| ProteinID:CAN76344.1 | ProteinID:CCB46504 | ProteinID:CCB46504.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:Cyclin_N |
| UniProt:F6H2R2 | EMBL:FN595230 | GO:GO:0000307 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016538 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0045737 | GO:GO:0045944 | GO:GO:1901409 | EntrezGene:LOC100256429 | wikigene:LOC100256429 | PFAM:PF00134 |
| PIRSF:PIRSF036580 | PANTHER:PTHR10026 | PANTHER:PTHR10026:SF103 | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI00021089D0 |
| ArrayExpress:VIT_00s0125g00270 | EnsemblPlantsGene:VIT_00s0125g00270 | EnsemblPlants:VIT_00s0125g00270.t01 | unigene:Vvi.5729 | RefSeq:XP_002270692 | RefSeq:XP_002270692.2 |
| RefSeq:XP_010645968.1 | RefSeq:XP_010645969.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrUn:+:1929272..1946560
Molecular Weight (calculated)
65380.9 Da
IEP (calculated)
6.472
GRAVY (calculated)
-0.762
Length
586 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLLTGDPS NSGIFEDGSC CNSKDGLEEG GHWYMSRKEI EENSPSRRDG IDLRKETYFR KSYCTFLQDL GMRLKVPQVT IATAIIFCHR FFLCQSHAKN
101: DRRTIATVCM FLAGKVEETP RPLKDVILVS YEIIHKRDPA AVQKIKQKEV YEQQKELILI GERVVLATLG FDLNVHHPYK PLVEAMKKFK AAQDALAQVA
201: WNFALAQVAW NFVNDGLRTS LCLQFKPDHI AAGAIFLAAK FLKVKLPSDG EVVWWQEFDV TPRQLEEISN QMLELYEQNR VPPPQGSEME VNASGGLNHR
301: GTTKAPVANE ESLPANSHAQ AGVGVVSTLK PVTARQSWHR PASDNSTAGN HGALVKGTQN LSNDSGSSEM GSVITDQMAD GEAPGGFKSV PDQIEGDNEE
401: GNGGRDDTTS TREWKNNGAL HKSERVVGGQ NMETQEGSSP KSPQDGMIKM IDKDKVKAAL EKRRKSRGEV IRKKELVDED DLIERELEDG VELDAKDEKI
501: KRERRQSWSK TESPCYTKDQ KHTGDRNPLG TEVENIEEGE MLDDASPKFN NRKRKERSPP DIQSEAKKWT DSAPGCHHRS NHQGHP
101: DRRTIATVCM FLAGKVEETP RPLKDVILVS YEIIHKRDPA AVQKIKQKEV YEQQKELILI GERVVLATLG FDLNVHHPYK PLVEAMKKFK AAQDALAQVA
201: WNFALAQVAW NFVNDGLRTS LCLQFKPDHI AAGAIFLAAK FLKVKLPSDG EVVWWQEFDV TPRQLEEISN QMLELYEQNR VPPPQGSEME VNASGGLNHR
301: GTTKAPVANE ESLPANSHAQ AGVGVVSTLK PVTARQSWHR PASDNSTAGN HGALVKGTQN LSNDSGSSEM GSVITDQMAD GEAPGGFKSV PDQIEGDNEE
401: GNGGRDDTTS TREWKNNGAL HKSERVVGGQ NMETQEGSSP KSPQDGMIKM IDKDKVKAAL EKRRKSRGEV IRKKELVDED DLIERELEDG VELDAKDEKI
501: KRERRQSWSK TESPCYTKDQ KHTGDRNPLG TEVENIEEGE MLDDASPKFN NRKRKERSPP DIQSEAKKWT DSAPGCHHRS NHQGHP
001: MAGVLAGECS YSESGVSSHS RNSHEKQEEV SRWYFGRKEI EENSPSRLDG IDLKKETYLR KSYCTFLQDL GMRLKVPQVT IATAIIFCHR FFFRQSHAKN
101: DRRTIATVCM FLAGKVEETP RPLKDVIFVS YEIINKKDPG ASQKIKQKEV YEQQKELILN GEKIVLSTLG FDLNVYHPYK PLVEAIKKFK VAQNALAQVA
201: WNFVNDGLRT SLCLQFKPHH IAAGAIFLAA KFLKVKLPSD GEKVWWQEFD VTPRQLEDVS NQMLELYEQN RVPASQGSEV ESSVGGGSAQ RPGSRNAVST
301: DEHVGSRQTS SVRSTHEQSN SDNHGGSSKG VLNQNNENGG GEAANVSVDN KEEIERETKE SSLHLESHPA HKDNVREAPH NSRPLVEGPG KDNSEREGGE
401: LQDDGAVHKS RNVDVGDALI SQSPKDLKLL RDKVKAKREK AKKLLGERTR KKDLMDEDDL IERELEDVQL AVEDEKTKER KVQSRPKAEN SDLMGTEHGE
501: ILDVKGEVKN TEEGEMVNNN VSPMMHSRKR KMGSPPEKQS EGKRRHNSEN GEESHKTSRG SSHHGDREHR RHSQENNHS
101: DRRTIATVCM FLAGKVEETP RPLKDVIFVS YEIINKKDPG ASQKIKQKEV YEQQKELILN GEKIVLSTLG FDLNVYHPYK PLVEAIKKFK VAQNALAQVA
201: WNFVNDGLRT SLCLQFKPHH IAAGAIFLAA KFLKVKLPSD GEKVWWQEFD VTPRQLEDVS NQMLELYEQN RVPASQGSEV ESSVGGGSAQ RPGSRNAVST
301: DEHVGSRQTS SVRSTHEQSN SDNHGGSSKG VLNQNNENGG GEAANVSVDN KEEIERETKE SSLHLESHPA HKDNVREAPH NSRPLVEGPG KDNSEREGGE
401: LQDDGAVHKS RNVDVGDALI SQSPKDLKLL RDKVKAKREK AKKLLGERTR KKDLMDEDDL IERELEDVQL AVEDEKTKER KVQSRPKAEN SDLMGTEHGE
501: ILDVKGEVKN TEEGEMVNNN VSPMMHSRKR KMGSPPEKQS EGKRRHNSEN GEESHKTSRG SSHHGDREHR RHSQENNHS
Arabidopsis Description
Cyclin family protein [Source:UniProtKB/TrEMBL;Acc:F4KD43]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.