Factsheet for Bra020954.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76472	Canola	nucleus	96.96	96.6
CDY09329	Canola	nucleus	96.96	96.23
Zm00001d038497_P001	Maize	cytosol, extracellular, peroxisome	26.57	86.96
CDX99359	Canola	nucleus	85.01	83.9
AT4G19600.1	Thale cress	nucleus	84.63	82.44
Bra021950.1-P	Field mustard	nucleus	77.04	72.63
Bra025087.1-P	Field mustard	nucleus	77.8	72.31
Zm00001d027790_P001	Maize	cytosol	34.35	67.04
TraesCS4A01G199300.1	Wheat	nucleus	51.8	57.72
TraesCS4D01G113600.1	Wheat	nucleus	51.99	57.08
TraesCS4B01G116000.1	Wheat	nucleus	51.8	56.99
EES11326	Sorghum	nucleus	52.75	56.73
HORVU4Hr1G021250.6	Barley	nucleus	51.42	56.58
Zm00001d026030_P014	Maize	nucleus	52.56	56.53
HORVU2Hr1G083340.2	Barley	nucleus	51.42	55.76
KRH50485	Soybean	nucleus	59.96	55.73
TraesCS2A01G323500.1	Wheat	nucleus	51.42	55.65
TraesCS2B01G358600.1	Wheat	nucleus	51.04	55.24
Zm00001d020158_P001	Maize	nucleus	42.88	54.99
KRG89442	Soybean	nucleus	59.2	54.93
TraesCS2D01G339400.1	Wheat	nucleus	51.42	54.86
HORVU0Hr1G007890.2	Barley	cytosol, nucleus	39.66	54.86
KRG89447	Soybean	nucleus	58.25	54.14
TraesCS4A01G199600.1	Wheat	nucleus	42.31	53.61
TraesCS4B01G115800.1	Wheat	nucleus	42.13	53.37
VIT_00s0125g00270.t01	Wine grape	nucleus	58.25	52.39
EER88086	Sorghum	nucleus	47.25	52.31
TraesCS4D01G113400.1	Wheat	nucleus	43.45	51.58
Os12t0485400-01	Rice	nucleus	52.56	51.01
TraesCS5A01G103900.2	Wheat	nucleus	50.66	50.76
Zm00001d027376_P002	Maize	nucleus, plastid	53.13	50.18
HORVU5Hr1G038970.16	Barley	nucleus	51.8	50.09
GSMUA_Achr6P04070_001	Banana	nucleus	46.11	50.0
TraesCS5D01G121900.1	Wheat	nucleus	52.75	49.64
Bra013402.1-P	Field mustard	nucleus	38.14	49.63
Bra006723.1-P	Field mustard	nucleus	24.86	49.62
TraesCS5B01G112100.2	Wheat	nucleus	53.32	48.28
Bra031514.1-P	Field mustard	cytosol	28.27	47.15
HORVU4Hr1G021220.13	Barley	cytosol	36.81	44.09
OQU93178	Sorghum	nucleus	46.3	41.78
Bra030056.1-P	Field mustard	cytosol	24.67	41.53
KXG23456	Sorghum	nucleus	44.78	40.14
Bra010927.1-P	Field mustard	nucleus	23.53	38.75
Bra037473.1-P	Field mustard	mitochondrion	10.44	26.32
Bra020685.1-P	Field mustard	cytosol	8.92	24.1
Bra012508.1-P	Field mustard	nucleus	18.6	23.73
Bra020686.1-P	Field mustard	cytosol	11.01	22.92
Bra032800.1-P	Field mustard	cytosol	14.42	12.22

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.9	MapMan:15.3.2.1.2	EnsemblPlantsGene:Bra020954	EnsemblPlants:Bra020954.1	EnsemblPlants:Bra020954.1-P
InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_N	GO:GO:0007275	GO:GO:0008150	GO:GO:0009605
GO:GO:0009607	GO:GO:0009615	GO:GO:0009653	GO:GO:0009987	GO:GO:0010090	GO:GO:0016043
GO:GO:0030154	GO:GO:0048366	UniProt:M4DWQ8	PFAM:PF00134	PIRSF:PIRSF036580	PANTHER:PTHR10026
PANTHER:PTHR10026:SF103	SMART:SM00385	SUPFAM:SSF47954	UniParc:UPI0002545838	SEG:seg	:

Description

AT4G19600 (E=7e-212) CYCT1;4 | CYCT1;4; cyclin-dependent protein kinase

Coordinates

chrA08:+:10999895..11002557

Molecular Weight (calculated)

58735.6 Da

IEP (calculated)

6.520

GRAVY (calculated)

-0.867

Length

527 amino acids

Sequence
(BLAST)

001: MAGVLGGECS YNESGVSSYS RNSNENQEEG SRWYFGRKEI EENSPSRLDG IDLKKETYLR KSYCTFLQDL GMRLKVPQIT IATSIIFCHR FFIRQSHARN
101: DRRTIATVCM FLAGKVEETP RPLKDVIVVS YEIIHKKDPA TAQKIKQKEV YEQQKELILS GEKIVLSTLG FDFNVYHPYK PLVEAIKKFK VAQNALAQVA
201: WNFVNDGLRT SLCLQFKPHH IAAGAIFLAA KFLKVKLPSD GEKVWWQEFD VTPRQLEDVS NQMLELYEQN RVPASQGSEV ESSVGGGSGH HVGSKPISAQ
301: RPSHEHSKSD SHGGSSKATE NQRNENGSGE AGSVITEHTE NQPADKSRPG VEEPAKDKTE RTGAHLPDDS AAHDKSTSDV PVSQSPKDLK LLRDKVKAKL
401: EAKKLQGERT RKKDLIDEDD LIERELEDVE LAVDDDKDSQ KKNSKTNHMG SEQGELPDGN KLVGNAEEGE MLDDVSLTVP SRKRKMESPC EKQLGEGKRQ
501: HNDSSEKLEE GDKTSRGGSS SHNSHGD

Best Arabidopsis Sequence Match ( AT4G19600.1 )
(BLAST)

001: MAGVLAGDCS FGESGVSSYS RNSNEKQDEV ARWYFGRKEI EENSPSRLDS IDLKKETYLR KSYCTFLQDL GMRLKVPQVT IATAIIFCHR FFIRQSHARN
101: DRRTIATVCM FLAGKVEETP RPLKDVIVVS YEIIHKKDPT TAQKIKQKEV YEQQKELILN GEKIVLSTLG FDFNVYHPYK PLVEAIKKFK VAQNALAQVA
201: WNFVNDGLRT SLCLQFKPHH IAAGAIFLAA KFLKVKLPSD GEKVWWQEFD VTPRQLEDVS NQMLELYEQN RVPASQVSEV ESSVGGGSAH HVGSRPSARL
301: THEHSNSDNL GGSTKATQNR SNDNGSGEAG SVITEQKGER DTETKDSMHT ESHPAHKSRS GVEAPGEDKI EKAGAHFPED DKSRIVGTAD VTVSQSPKDI
401: KMFRDKVKAK LEAKKVQGEK TRKKDLVDED DLIERELEDV ELAVEDDKDI QNKSSMGTEH GEILDGNNLV VNTEEGEMID DVSSTMPSRK RKMESPCEKQ
501: LGEGKRRHDN SENVEEGQKT NPGGSSHSYG DREPRRHSQE R

Arabidopsis Description

CYCT1-4Cyclin-T1-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.