Factsheet for Bra020686.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51053	Canola	cytosol	100.0	100.0
CDY69301	Canola	cytosol	99.21	99.21
AT5G48630.2	Thale cress	cytosol, nucleus, plastid	90.51	89.45
KRH46635	Soybean	cytosol	74.7	74.7
KRG99632	Soybean	cytosol	73.91	73.91
PGSC0003DMT400051796	Potato	cytosol	72.33	73.2
Solyc06g083260.2.1	Tomato	cytosol, nucleus	72.33	73.2
Bra037473.1-P	Field mustard	mitochondrion	58.89	71.29
VIT_00s0360g00050.t01	Wine grape	cytosol	69.96	70.52
Bra020685.1-P	Field mustard	cytosol	53.75	69.74
GSMUA_Achr7P02730_001	Banana	cytosol	67.19	64.64
Os09t0504400-01	Rice	nucleus	64.43	63.42
EER97007	Sorghum	nucleus	63.24	62.26
TraesCS6D01G332100.1	Wheat	peroxisome	62.85	61.87
TraesCS5D01G289300.2	Wheat	peroxisome	62.85	61.63
TraesCS5B01G281600.1	Wheat	peroxisome	62.85	61.63
TraesCS6A01G349600.1	Wheat	peroxisome	62.45	61.48
TraesCS6B01G382700.1	Wheat	peroxisome	62.45	61.48
TraesCS5A01G282200.1	Wheat	peroxisome	62.06	60.85
TraesCS5A01G057600.1	Wheat	mitochondrion	47.04	59.2
HORVU6Hr1G083890.3	Barley	plastid	62.85	52.48
Zm00001d021031_P002	Maize	endoplasmic reticulum, vacuole	63.24	50.79
Bra006723.1-P	Field mustard	nucleus	21.34	20.45
Bra030056.1-P	Field mustard	cytosol	21.34	17.25
Bra010927.1-P	Field mustard	nucleus	21.34	16.88
Bra031514.1-P	Field mustard	cytosol	18.97	15.19
Bra013402.1-P	Field mustard	nucleus	22.13	13.83
Bra012508.1-P	Field mustard	nucleus	18.18	11.14
Bra020954.1-P	Field mustard	nucleus	22.92	11.01
Bra025087.1-P	Field mustard	nucleus	24.51	10.93
Bra021950.1-P	Field mustard	nucleus	24.11	10.91
Bra032800.1-P	Field mustard	cytosol	15.41	6.27

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.3	MapMan:15.3.3.4.4	EnsemblPlantsGene:Bra020686	EnsemblPlants:Bra020686.1	EnsemblPlants:Bra020686.1-P
InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:CyclinC/Ssn8	InterPro:Cyclin_N	GO:GO:0003674	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016538	GO:GO:0016592	GO:GO:0019538	GO:GO:0030234
GO:GO:0045859	UniProt:M4DVZ2	PFAM:PF00134	PIRSF:PIRSF028758	PANTHER:PTHR10026	PANTHER:PTHR10026:SF7
SMART:SM00385	SUPFAM:SSF47954	UniParc:UPI0002546328	:	:	:

Description

AT5G48630 (E=1e-139) | cyclin family protein

Coordinates

chrA02:-:23754764..23756230

Molecular Weight (calculated)

29769.2 Da

IEP (calculated)

7.116

GRAVY (calculated)

-0.165

Length

253 amino acids

Sequence
(BLAST)

001: MASNFWTSTH YKELKDPEEI NVVHPLDAQR GISLEDFKLI KLHMSNYISK LAQHIKIRQR VVATAVTYMR RVYTRKSLTE YEPRLVAPTC LYLACKAEES
101: VVHAKILVFY IKKLYADEKF RYEIKDILEM EMKVLEALNF YLVVFHPYRS LPEYLQDSGL NDTSMTHLTW GLVNDTYKMD LILTHPPHLI TIACIYVASV
201: YKEKDIKTWF EELSADMNIV KNIAMEILDF YENHRMFTEE RVHAAFNKLA TSP

Best Arabidopsis Sequence Match ( AT5G48630.1 )
(BLAST)

001: MASNFWTSTH YKELKDPEEV NVVHPLDAQR GISVEDFRLI KLHMSNYISK LAQHIKIRQR VVATAVTYMR RVYTRKSLTE YEPRLVAPTC LYLACKAEES
101: VVHAKLLVFY MKKLYADEKF RYEIKDILEM EMKVLEALNF YLVVFHPYRS LPEFLQDSGI NDTSMTHLTW GLVNDTYRMD LILIHPPFLI TLACIYIASV
201: HKEKDIKTWF EELSVDMNIV KNIAMEILDF YENHRLFTEE RVHAAFNKLA TNP

Arabidopsis Description

Cyclin family protein [Source:UniProtKB/TrEMBL;Acc:F4K359]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.