Factsheet for Bra021950.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY26395	Canola	nucleus	93.38	99.24
CDY65933	Canola	nucleus	94.45	92.96
Bra025087.1-P	Field mustard	nucleus	87.3	86.07
Zm00001d038497_P001	Maize	cytosol, extracellular, peroxisome	24.33	84.47
AT5G45190.2	Thale cress	nucleus	88.19	83.56
Bra020954.1-P	Field mustard	nucleus	72.63	77.04
Zm00001d027790_P001	Maize	cytosol	32.74	67.78
TraesCS4A01G199300.1	Wheat	nucleus	49.55	58.56
EES11326	Sorghum	nucleus	50.8	57.96
TraesCS4D01G113600.1	Wheat	nucleus	49.55	57.71
TraesCS4B01G116000.1	Wheat	nucleus	49.2	57.41
HORVU4Hr1G021250.6	Barley	nucleus	49.2	57.41
Zm00001d026030_P014	Maize	nucleus	50.27	57.35
HORVU2Hr1G083340.2	Barley	nucleus	49.2	56.58
TraesCS2A01G323500.1	Wheat	nucleus	49.02	56.26
TraesCS2B01G358600.1	Wheat	nucleus	48.84	56.06
KRH50485	Soybean	nucleus	56.71	55.91
TraesCS2D01G339400.1	Wheat	nucleus	49.2	55.67
HORVU0Hr1G007890.2	Barley	cytosol, nucleus	37.75	55.38
KRG89442	Soybean	nucleus	56.17	55.28
Zm00001d020158_P001	Maize	nucleus	40.25	54.74
TraesCS4A01G199600.1	Wheat	nucleus	40.61	54.57
KRG89447	Soybean	nucleus	55.28	54.5
TraesCS4B01G115800.1	Wheat	nucleus	40.43	54.33
EER88086	Sorghum	nucleus	45.98	53.99
VIT_00s0125g00270.t01	Wine grape	nucleus	55.64	53.07
TraesCS4D01G113400.1	Wheat	nucleus	42.04	52.93
GSMUA_Achr6P04070_001	Banana	nucleus	44.54	51.23
Os12t0485400-01	Rice	nucleus	49.73	51.2
Zm00001d027376_P002	Maize	nucleus, plastid	50.63	50.72
Bra013402.1-P	Field mustard	nucleus	36.67	50.62
TraesCS5A01G103900.2	Wheat	nucleus	47.23	50.19
HORVU5Hr1G038970.16	Barley	nucleus	48.48	49.72
Bra031514.1-P	Field mustard	cytosol	27.73	49.05
TraesCS5D01G121900.1	Wheat	nucleus	49.02	48.93
TraesCS5B01G112100.2	Wheat	nucleus	50.63	48.63
Bra006723.1-P	Field mustard	nucleus	22.9	48.48
HORVU4Hr1G021220.13	Barley	cytosol	35.06	44.55
OQU93178	Sorghum	nucleus	45.44	43.49
Bra030056.1-P	Field mustard	cytosol	24.33	43.45
KXG23456	Sorghum	nucleus	42.93	40.82
Bra010927.1-P	Field mustard	nucleus	22.9	40.0
Bra037473.1-P	Field mustard	mitochondrion	10.73	28.71
Bra020685.1-P	Field mustard	cytosol	8.94	25.64
Bra012508.1-P	Field mustard	nucleus	18.25	24.7
Bra020686.1-P	Field mustard	cytosol	10.91	24.11
Bra032800.1-P	Field mustard	cytosol	13.6	12.22

Protein Annotations

EnsemblPlants:Bra021950.1	EnsemblPlants:Bra021950.1-P	EnsemblPlantsGene:Bra021950	Gene3D:1.10.472.10	InterPro:Cyclin-like	InterPro:Cyclin-like_sf
InterPro:Cyclin_N	ncoils:Coil	PANTHER:PTHR10026	PANTHER:PTHR10026:SF103	PFAM:PF00134	PIRSF:PIRSF036580
SEG:seg	SMART:SM00385	SUPFAM:SSF47954	UniParc:UPI00025457BB	UniProt:M4DZK3	MapMan:13.1.1.1.9
MapMan:15.3.2.1.2	:	:	:	:	:

Description

AT5G45190 (E=6e-239) | cyclin family protein

Coordinates

chrA02:-:17760136..17762590

Molecular Weight (calculated)

62364.0 Da

IEP (calculated)

7.294

GRAVY (calculated)

-0.885

Length

559 amino acids

Sequence
(BLAST)

001: MAGVLAGECS YGESGVSSHS RNSHEKQDEL SRWYFGRKEI EENSPSRLDG IDLKKETYLR KSYCTFLQDL GMRLKVPQVT IATAIIFCHR FFFRQSHAKN
101: DRRTIATVCM FLAGKVEETP RPLNNVISVS YEIINKKDPG AAQKIKQKEV YEQQKELILN GEKIVLSTLG FDLNVLHPYK PLVEAIKKFK VAQNALAQVA
201: WNFVNDGLRT SLCLQFQPHH IAAGAIFLAA KFLKVKLPSD GEKVWWQEFD VTPRQLEDVS NQMLELYEQN RVPASQGSEV ESSVGGGSAH RPGSRNATST
301: DEHVGSRQAS ARSSHEPSNS DNHGGSSKGG LDQNNGNGDV EAVNASVDHK EEIKREREES LHHAANSRPL VEGAGKDNSE RESGELPDDG AVHKSRNVET
401: GVVAPIGQSP KDLKMLRDKV LKAKREKAKK LLGERTMKKD LMDEDDFIER ELEDVELAVE DENAKQKNVP KAENSDLMGT EHGAVKNAEE GEMVNDVSQM
501: MHSRKRKMGS PPEKQSEGKR RHSSENGEQG HKTSRGGSSS SSHHGDREHR RHSQERNHS

Best Arabidopsis Sequence Match ( AT5G45190.1 )
(BLAST)

001: MAGVLAGECS YSESGVSSHS RNSHEKQEEV SRWYFGRKEI EENSPSRLDG IDLKKETYLR KSYCTFLQDL GMRLKVPQVT IATAIIFCHR FFFRQSHAKN
101: DRRTIATVCM FLAGKVEETP RPLKDVIFVS YEIINKKDPG ASQKIKQKEV YEQQKELILN GEKIVLSTLG FDLNVYHPYK PLVEAIKKFK VAQNALAQVA
201: WNFVNDGLRT SLCLQFKPHH IAAGAIFLAA KFLKVKLPSD GEKVWWQEFD VTPRQLEDVS NQMLELYEQN RVPASQGSEV ESSVGGGSAQ RPGSRNAVST
301: DEHVGSRQTS SVRSTHEQSN SDNHGGSSKG VLNQNNENGG GEAANVSVDN KEEIERETKE SSLHLESHPA HKDNVREAPH NSRPLVEGPG KDNSEREGGE
401: LQDDGAVHKS RNVDVGDALI SQSPKDLKLL RDKVKAKREK AKKLLGERTR KKDLMDEDDL IERELEDVQL AVEDEKTKER KVQSRPKAEN SDLMGTEHGE
501: ILDVKGEVKN TEEGEMVNNN VSPMMHSRKR KMGSPPEKQS EGKRRHNSEN GEESHKTSRG SSHHGDREHR RHSQENNHS

Arabidopsis Description

Cyclin family protein [Source:UniProtKB/TrEMBL;Acc:F4KD43]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.