Factsheet for Zm00001d026030_P014

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038497_P001	Maize	cytosol, extracellular, peroxisome	32.04	97.52
EES11326	Sorghum	nucleus	93.88	93.88
TraesCS2A01G323500.1	Wheat	nucleus	84.08	84.6
TraesCS2B01G358600.1	Wheat	nucleus	83.88	84.39
HORVU2Hr1G083340.2	Barley	nucleus	83.67	84.36
TraesCS2D01G339400.1	Wheat	nucleus	84.49	83.81
TraesCS4A01G199300.1	Wheat	nucleus	80.82	83.72
TraesCS4D01G113600.1	Wheat	nucleus	81.43	83.12
TraesCS4B01G116000.1	Wheat	nucleus	80.61	82.46
HORVU4Hr1G021250.6	Barley	nucleus	80.2	82.05
Zm00001d027376_P002	Maize	nucleus, plastid	90.2	79.21
HORVU0Hr1G007890.2	Barley	cytosol, nucleus	61.22	78.74
Zm00001d027790_P001	Maize	cytosol	41.22	74.81
TraesCS4A01G199600.1	Wheat	nucleus	61.22	72.12
TraesCS4B01G115800.1	Wheat	nucleus	61.02	71.88
TraesCS4D01G113400.1	Wheat	nucleus	64.9	71.62
GSMUA_Achr6P30140_001	Banana	nucleus	70.61	68.24
Zm00001d020158_P001	Maize	nucleus	54.49	64.96
GSMUA_Achr6P31620_001	Banana	cytosol	63.27	60.43
KRH50485	Soybean	nucleus	62.04	53.62
CDY26395	Canola	nucleus	57.35	53.42
VIT_19s0027g01670.t01	Wine grape	nucleus	67.76	53.29
KRG89442	Soybean	nucleus	61.63	53.17
HORVU4Hr1G021220.13	Barley	cytosol	47.55	52.95
AT4G19600.1	Thale cress	nucleus	58.37	52.87
VIT_00s0125g00270.t01	Wine grape	nucleus	63.06	52.73
Bra020954.1-P	Field mustard	nucleus	56.53	52.56
KRG89447	Soybean	nucleus	60.61	52.38
CDX76472	Canola	nucleus	56.53	52.36
CDY09329	Canola	nucleus	56.73	52.35
CDX99359	Canola	nucleus	56.73	52.06
AT1G35440.1	Thale cress	cytosol	26.12	51.82
CDX71123	Canola	nucleus	27.76	51.52
KRH13708	Soybean	nucleus	63.67	51.49
KRH43745	Soybean	nucleus	64.08	51.39
Bra025087.1-P	Field mustard	nucleus	59.39	51.32
Solyc10g078180.1.1	Tomato	nucleus	64.29	50.72
CDX82583	Canola	nucleus	58.37	50.44
Bra021950.1-P	Field mustard	nucleus	57.35	50.27
CDY39416	Canola	nucleus	59.39	50.26
CDX88692	Canola	nucleus	26.73	49.62
CDY65933	Canola	nucleus	57.35	49.47
Bra006723.1-P	Field mustard	nucleus	26.53	49.24
AT5G45190.2	Thale cress	nucleus	59.18	49.15
CDX78940	Canola	nucleus	38.57	46.67
Bra013402.1-P	Field mustard	nucleus	38.57	46.67
CDX99363	Canola	nucleus	38.37	46.65
CDY54138	Canola	cytosol	29.8	46.2
CDY24526	Canola	cytosol, nucleus, peroxisome	29.59	45.89
Bra031514.1-P	Field mustard	cytosol	29.18	45.25
AT4G19560.1	Thale cress	nucleus	42.45	45.22
Zm00001d033021_P001	Maize	cytosol	11.84	31.69
Zm00001d015164_P001	Maize	cytosol	29.59	26.65
Zm00001d019681_P002	Maize	nucleus	11.22	25.82
Zm00001d040936_P002	Maize	plastid	17.14	25.61
Zm00001d017392_P009	Maize	cytosol	32.45	24.24
Zm00001d051291_P003	Maize	cytosol	32.86	23.92
Zm00001d021031_P002	Maize	endoplasmic reticulum, vacuole	13.67	21.27
Zm00001d033023_P001	Maize	cytosol	9.18	18.29
Zm00001d019684_P002	Maize	mitochondrion	9.8	17.2

Protein Annotations

EnsemblPlants:Zm00001d026030_P014	EnsemblPlants:Zm00001d026030_T014	EnsemblPlantsGene:Zm00001d026030	EntrezGene:100384646	Gene3D:1.10.472.10	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:Cyclin_N	PANTHER:PTHR10026	PANTHER:PTHR10026:SF103	PFAM:PF00134	PIRSF:PIRSF036580
ProteinID:AQK45345.1	SEG:seg	SMART:SM00385	SUPFAM:SSF47954	UniParc:UPI000843C1EE	UniProt:A0A1D6JBU3
MapMan:13.1.1.1.9	MapMan:15.3.2.1.2	:	:	:	:

Description

Cyclin-T1-5

Coordinates

chr10:+:136398752..136404366

Molecular Weight (calculated)

56494.7 Da

IEP (calculated)

7.801

GRAVY (calculated)

-0.867

Length

490 amino acids

Sequence
(BLAST)

001: MDIMQTSDSS HHGIVENSPY RIPYDRHAEG GQLGASWYFS RKEIEENSLS RRDGIDLKKE SYLRKSYCTF LQDLGMRLKV PQVTIATAIV FCHRFFLRQS
101: HAKNDRRTIA TVCMFLAGKV EETPRPLKDV ILLSYEIIHK KDPAAVQRIK QKEVYEQQKE LILLGERVVL VTLGFDLNVN HPYKPLVEAI KIFKVAQNAL
201: AQVAWNFVND GVYRLRTSLC LQFKPHHIAA GAIFLAAKFL KVKLPSDGEK VWWQEFDVTP WQLEEVSNQM LELYEQNRVQ PPPSQGNDTE GSSASVANQR
301: VPGKVPGVAD EPPAHDHNQA PRPSSQQNML DHRGYDHPHP DKQNYRIPPN DARDGTANSN EGPNVSSSMM DAMKKVNKDK VKAALEKRRK SKGDFSRKVD
401: VMDDDDLIER ELEHGVELAA EDEKVKQERK QSWPHLAHHQ STNRENTEEG ELSMDSQEYR SPEHDNRKRK DVREYRNYDR DERDLKRLRS

Best Arabidopsis Sequence Match ( AT4G19560.1 )
(BLAST)

001: MDEALNENAS GSESDASSVA SNLHDDEIIP WFFSREEIER NSPSRRDGID LKTETRLRDS YCTFLEILGE RLKVPQVTIA TAIFFCHRFF LRQSHAKNDR
101: QTIATVCMLL AGKVEETPVT LEDVIIASYE RIHKKDLAGA QRKEVYDQQK ELVLIGEELV LSTLNFDLCI SHPYKPLVEA IKKYMVEDAK TQLAQFAWNF
201: VNDCLRTTLC LQYQPHHIAA GAILLAAELP TVDLQSYREV LCQEFDITPC QLEDIRGQIL ELYERIPTSQ ESKVESSGGV AVVHQPISRD MASTEKCPSS
301: DIEGGSSQVN LSQSDDHSVH DGSRSEGIGE VNSESEAQKN LQDHSVGNIM VEKSDDVGVV QLKKDLQLHQ EEVESKQEKD KKSFEKDITK IDLMDEKDLT
401: ESEVEDEINK TMQTGRQIFM KVEDPDDNMT VEHSEIRNAN NSGVDDELVA DTCLINDSDL

Arabidopsis Description

CYCT1-2Cyclin-T1-2 [Source:UniProtKB/Swiss-Prot;Acc:Q56YF8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.