Factsheet for Zm00001d019681_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033021_P001	Maize	cytosol	81.22	94.54
HORVU6Hr1G056640.2	Barley	plastid	32.39	81.18
PGSC0003DMT400009464	Potato	cytosol	58.69	51.87
TraesCS6A01G331500.1	Wheat	nucleus	80.28	41.5
TraesCS6B01G362300.1	Wheat	nucleus	79.81	41.46
TraesCS6D01G310800.2	Wheat	nucleus	79.34	41.22
HORVU6Hr1G080430.3	Barley	nucleus	79.81	38.12
Solyc01g098350.2.1	Tomato	nucleus	69.95	34.98
Bra012508.1-P	Field mustard	nucleus	67.61	34.87
CDY51595	Canola	nucleus	67.61	34.87
GSMUA_Achr8P06830_001	Banana	nucleus	72.3	34.61
CDY03883	Canola	nucleus	67.14	34.29
AT2G26430.1	Thale cress	cytosol	65.73	33.65
PGSC0003DMT400057824	Potato	nucleus	69.95	33.26
KRG92800	Soybean	nucleus	69.01	33.18
KRH33999	Soybean	nucleus	69.01	32.81
KXG30252	Sorghum	nucleus	48.83	32.2
VIT_12s0028g00110.t01	Wine grape	nucleus	69.01	26.97
Zm00001d027790_P001	Maize	cytosol	25.35	20.0
Zm00001d038497_P001	Maize	cytosol, extracellular, peroxisome	13.15	17.39
Zm00001d040936_P002	Maize	plastid	26.76	17.38
Bra032800.1-P	Field mustard	cytosol	48.83	16.72
CDY27590	Canola	cytosol	48.83	16.72
Zm00001d021031_P002	Maize	endoplasmic reticulum, vacuole	20.66	13.97
Zm00001d020158_P001	Maize	nucleus	24.41	12.65
Zm00001d026030_P014	Maize	nucleus	25.82	11.22
Zm00001d015164_P001	Maize	cytosol	26.76	10.48
Zm00001d027376_P002	Maize	nucleus, plastid	26.29	10.04
CDX84949	Canola	cytosol	15.96	9.69
Zm00001d017392_P009	Maize	cytosol	29.11	9.45
Zm00001d051291_P003	Maize	cytosol	29.58	9.36
Zm00001d019684_P002	Maize	mitochondrion	7.98	6.09
Zm00001d033023_P001	Maize	cytosol	2.82	2.44

Protein Annotations

EnsemblPlants:Zm00001d019681_P002	EnsemblPlants:Zm00001d019681_T002	EnsemblPlantsGene:Zm00001d019681	Gene3D:1.10.472.10	InterPro:Cyclin-like	InterPro:Cyclin-like_sf
PANTHER:PTHR10026	PANTHER:PTHR10026:SF100	PIRSF:PIRSF036580	ProteinID:ONM53545.1	SUPFAM:SSF47954	UniParc:UPI0008438219
UniProt:A0A1D6HZR0	MapMan:35.1	:	:	:	:

Description

Cyclin-L1-1

Coordinates

chr7:+:50682569..50688689

Molecular Weight (calculated)

24816.9 Da

IEP (calculated)

8.475

GRAVY (calculated)

-0.419

Length

213 amino acids

Sequence
(BLAST)

001: MIYTAIDTFY LTDEQLRDSP SRKDGIDEAT ETALRVYGCD LIQESGILLR LPQAVMATAQ VLFHRFYCKK SFVRFSAKRR AECWAAGSSE LSAGLLVVGE
101: KSQARERMGE KGKKWLAGKL EESPRKSRHI IFVFHRMECR RENLPIEFLD VFSKKYSELR HDLIRTERHL LKEMGFICHV EHPHKFISNY LATLEAPPEL
201: TQEAWNLAND RYF

Best Arabidopsis Sequence Match ( AT2G26430.1 )
(BLAST)

001: MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH

Arabidopsis Description

CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.