Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012508.1-P | Field mustard | nucleus | 99.76 | 99.76 |
| CDY03883 | Canola | nucleus | 96.61 | 95.68 |
| AT2G26430.1 | Thale cress | cytosol | 87.65 | 87.02 |
| Zm00001d033021_P001 | Maize | cytosol | 35.84 | 80.87 |
| PGSC0003DMT400009464 | Potato | cytosol | 43.58 | 74.69 |
| Zm00001d019681_P002 | Maize | nucleus | 34.87 | 67.61 |
| KRG92800 | Soybean | nucleus | 72.16 | 67.27 |
| KRH33999 | Soybean | nucleus | 72.88 | 67.19 |
| HORVU6Hr1G056640.2 | Barley | plastid | 13.8 | 67.06 |
| Solyc01g098350.2.1 | Tomato | nucleus | 68.04 | 65.96 |
| PGSC0003DMT400057824 | Potato | nucleus | 68.52 | 63.17 |
| GSMUA_Achr8P06830_001 | Banana | nucleus | 66.34 | 61.57 |
| TraesCS6B01G362300.1 | Wheat | nucleus | 61.02 | 61.46 |
| TraesCS6D01G310800.2 | Wheat | nucleus | 60.77 | 61.22 |
| TraesCS6A01G331500.1 | Wheat | nucleus | 61.02 | 61.16 |
| Os01t0377500-01 | Rice | nucleus | 62.95 | 60.89 |
| KXG30252 | Sorghum | nucleus | 44.31 | 56.66 |
| HORVU6Hr1G080430.3 | Barley | nucleus | 58.84 | 54.48 |
| VIT_12s0028g00110.t01 | Wine grape | nucleus | 69.25 | 52.48 |
| Zm00001d019684_P002 | Maize | mitochondrion | 32.69 | 48.39 |
| CDY27590 | Canola | cytosol | 60.29 | 40.03 |
| Zm00001d033023_P001 | Maize | cytosol | 22.76 | 38.21 |
| CDX84949 | Canola | cytosol | 24.21 | 28.49 |
| CDX71123 | Canola | nucleus | 18.16 | 28.41 |
| CDX88692 | Canola | nucleus | 17.92 | 28.03 |
| CDY60279 | Canola | cytosol | 17.68 | 23.32 |
| CDY03933 | Canola | cytosol | 17.68 | 23.32 |
| CDY54138 | Canola | cytosol | 17.68 | 23.1 |
| CDY24526 | Canola | cytosol, nucleus, peroxisome | 17.19 | 22.47 |
| CDX90099 | Canola | nucleus | 17.43 | 22.36 |
| CDY11776 | Canola | cytosol | 17.19 | 22.19 |
| CDX85352 | Canola | cytosol | 12.11 | 19.84 |
| CDX86291 | Canola | cytosol | 11.86 | 19.44 |
| CDX78940 | Canola | nucleus | 18.89 | 19.26 |
| CDY51052 | Canola | cytosol | 11.62 | 19.12 |
| CDY66082 | Canola | cytosol | 11.62 | 19.05 |
| CDY26395 | Canola | nucleus | 24.21 | 19.01 |
| CDX99363 | Canola | nucleus | 18.4 | 18.86 |
| CDX99359 | Canola | nucleus | 23.97 | 18.54 |
| CDX76472 | Canola | nucleus | 23.73 | 18.53 |
| CDY09329 | Canola | nucleus | 23.73 | 18.46 |
| CDY51053 | Canola | cytosol | 11.14 | 18.18 |
| CDY69301 | Canola | cytosol | 11.14 | 18.18 |
| CDX82583 | Canola | nucleus | 24.7 | 17.99 |
| CDY39416 | Canola | nucleus | 24.7 | 17.62 |
| CDY65933 | Canola | nucleus | 24.21 | 17.61 |
| CDY05665 | Canola | endoplasmic reticulum, extracellular | 3.87 | 14.68 |
Protein Annotations
| EnsemblPlants:CDY51595 | EnsemblPlantsGene:GSBRNA2T00003800001 | Gene3D:1.10.472.10 | GO:A0A078IKN1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_N | PANTHER:PTHR10026 | PANTHER:PTHR10026:SF100 | PFAM:PF00134 | PIRSF:PIRSF036580 | ProteinID:CDY51595 |
| ProteinID:CDY51595.1 | SEG:seg | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI0004EDE730 | UniProt:A0A078IKN1 |
| MapMan:13.1.1.1.8 | : | : | : | : | : |
Description
BnaA07g36800DBnaA07g36800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IKN1]
Coordinates
chrLK033009:+:61595..64089
Molecular Weight (calculated)
47511.9 Da
IEP (calculated)
9.066
GRAVY (calculated)
-0.879
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MIYTAIDNFY LPEEQIKNSP SRKDGIDEAT ETTLRIYGCD LIQEAGILLR LPQAVMATGQ VLFHRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLDHL DLFSKKYSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSGID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSANSQSQS ATKDFSPAVG DAVDTKCPSG SESKDGKITT
301: PHEMATDAKK SDTESNSLPI VGDSREERRK VGESDREKER GRERDRVSRS HRDRGRDSDK ESDRERDKLK EHSHHRSRDR LKDSGDRSRH HSSRDRDYRE
401: SSHSSKDRRS RHH
101: VIIVFHRMEC RRENLPLDHL DLFSKKYSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSGID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSANSQSQS ATKDFSPAVG DAVDTKCPSG SESKDGKITT
301: PHEMATDAKK SDTESNSLPI VGDSREERRK VGESDREKER GRERDRVSRS HRDRGRDSDK ESDRERDKLK EHSHHRSRDR LKDSGDRSRH HSSRDRDYRE
401: SSHSSKDRRS RHH
001: MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH
Arabidopsis Description
CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.