CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92800	Soybean	nucleus	93.53	94.58
Zm00001d033021_P001	Maize	cytosol	33.26	81.42
PGSC0003DMT400009464	Potato	cytosol	41.52	77.18
Solyc01g098350.2.1	Tomato	nucleus	70.09	73.71
Bra012508.1-P	Field mustard	nucleus	67.41	73.12
CDY03883	Canola	nucleus	67.86	72.9
CDY51595	Canola	nucleus	67.19	72.88
AT2G26430.1	Thale cress	cytosol	67.63	72.84
PGSC0003DMT400057824	Potato	nucleus	69.87	69.87
Zm00001d019681_P002	Maize	nucleus	32.81	69.01
GSMUA_Achr8P06830_001	Banana	nucleus	68.53	68.99
HORVU6Hr1G056640.2	Barley	plastid	12.95	68.24
Os01t0377500-01	Rice	nucleus	63.17	66.28
TraesCS6D01G310800.2	Wheat	nucleus	59.82	65.37
TraesCS6B01G362300.1	Wheat	nucleus	59.82	65.37
TraesCS6A01G331500.1	Wheat	nucleus	59.82	65.05
KXG30252	Sorghum	nucleus	44.64	61.92
VIT_12s0028g00110.t01	Wine grape	nucleus	72.1	59.27
HORVU6Hr1G080430.3	Barley	nucleus	57.37	57.62
Zm00001d019684_P002	Maize	mitochondrion	32.81	52.69
Zm00001d033023_P001	Maize	cytosol	21.43	39.02
CDY27590	Canola	cytosol	48.21	34.73
Bra032800.1-P	Field mustard	cytosol	47.99	34.57
CDX84949	Canola	cytosol	20.09	25.64
KRH46635	Soybean	cytosol	11.61	20.55
KRH50485	Soybean	nucleus	25.22	19.93
KRG89447	Soybean	nucleus	25.22	19.93
KRG89442	Soybean	nucleus	25.22	19.89
KRG99632	Soybean	cytosol	11.16	19.76
KRH35545	Soybean	nucleus	15.62	18.82
KRH43745	Soybean	nucleus	25.22	18.49
KRG91263	Soybean	nucleus	15.4	18.4
KRH13708	Soybean	nucleus	24.78	18.32
KRH27619	Soybean	cytosol	14.06	16.94

Protein Annotations

Gene3D:1.10.472.10	EntrezGene:100815690	MapMan:13.1.1.1.8	EMBL:ACUP02006567	ncoils:Coil	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:Cyclin_N	EnsemblPlantsGene:GLYMA_10G158100	GO:GO:0000307	GO:GO:0003674	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006464	GO:GO:0007049
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016538	GO:GO:0019538
GO:GO:0030234	GO:GO:0045737	GO:GO:0045944	GO:GO:1901409	UniProt:K7LJN4	EnsemblPlants:KRH33999
ProteinID:KRH33999	ProteinID:KRH33999.1	PFAM:PF00134	PIRSF:PIRSF036580	PANTHER:PTHR10026	PANTHER:PTHR10026:SF100
SMART:SM00385	SUPFAM:SSF47954	UniParc:UPI000233CAD5	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:39209016..39213444

Molecular Weight (calculated)

51858.8 Da

IEP (calculated)

9.001

GRAVY (calculated)

-1.033

Length

448 amino acids

Sequence
(BLAST)

001: MIYTAIDTFY LTDEQLAISP SRKDGIDEAT ETSLRIYGCD LIQESGILLR LPQAVMATGQ VLFHRFYCKK SFARFNVKKV AASCVWLASK LEENPRKARQ
101: VIIVFHRMEC RREDFPMEHL DLYSKKYVDL KMELSRTERH ILKEMGFICH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FKSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDGEKSGID EVCRVLAHLY SLPKAQYIPV CKDGDFTFSN KSSESKSQST PKDVPQNSPP ADTDNSVPKG TQGEANIESN
301: GSKGAIVKVA IDKLKDSKRS DDESKGMSTE GEARDEPILK SKADRKIEAI ERRADRDRDR ERYRDRERDR DRDRDRTKSR DRDRGRDSDK EREREEAERG
401: KLKDRDHRSR ERAKDSGHSE KSKRHSSHDR DSHGSSYSSR EKDRHRHH

Best Arabidopsis Sequence Match ( AT2G26430.1 )
(BLAST)

001: MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH

Arabidopsis Description

CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.