Factsheet for Bra032800.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27590	Canola	cytosol	99.84	99.84
Bra012508.1-P	Field mustard	nucleus	39.87	60.05
PGSC0003DMT400009464	Potato	cytosol	23.15	59.75
AT2G26430.1	Thale cress	cytosol	39.39	58.89
Zm00001d033021_P001	Maize	cytosol	17.2	58.47
Zm00001d019681_P002	Maize	nucleus	16.72	48.83
KRG92800	Soybean	nucleus	34.24	48.08
KRH33999	Soybean	nucleus	34.57	47.99
Solyc01g098350.2.1	Tomato	nucleus	32.64	47.65
GSMUA_Achr8P06830_001	Banana	nucleus	32.96	46.07
PGSC0003DMT400057824	Potato	nucleus	32.96	45.76
TraesCS6D01G310800.2	Wheat	nucleus	30.06	45.61
TraesCS6A01G331500.1	Wheat	nucleus	29.9	45.15
TraesCS6B01G362300.1	Wheat	nucleus	29.74	45.12
Os01t0377500-01	Rice	nucleus	30.55	44.5
HORVU6Hr1G080430.3	Barley	nucleus	29.42	41.03
KXG30252	Sorghum	nucleus	20.42	39.32
VIT_12s0028g00110.t01	Wine grape	nucleus	33.12	37.8
Zm00001d019684_P002	Maize	mitochondrion	16.56	36.92
Zm00001d033023_P001	Maize	cytosol	13.67	34.55
HORVU6Hr1G056640.2	Barley	plastid	3.54	25.88
Bra006723.1-P	Field mustard	nucleus	9.16	21.59
Bra030056.1-P	Field mustard	cytosol	9.97	19.81
Bra010927.1-P	Field mustard	nucleus	10.13	19.69
Bra031514.1-P	Field mustard	cytosol	8.84	17.41
Bra037473.1-P	Field mustard	mitochondrion	5.63	16.75
Bra020685.1-P	Field mustard	cytosol	5.14	16.41
Bra013402.1-P	Field mustard	nucleus	10.29	15.8
Bra020686.1-P	Field mustard	cytosol	6.27	15.41
Bra020954.1-P	Field mustard	nucleus	12.22	14.42
Bra025087.1-P	Field mustard	nucleus	12.54	13.76
Bra021950.1-P	Field mustard	nucleus	12.22	13.6

Protein Annotations

EnsemblPlants:Bra032800.1	EnsemblPlants:Bra032800.1-P	EnsemblPlantsGene:Bra032800	Gene3D:1.10.472.10	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	PANTHER:PTHR10026	PANTHER:PTHR10026:SF100	SMART:SM00385
SUPFAM:SSF47954	TMHMM:TMhelix	UniParc:UPI0002542605	UniProt:M4EVG7	MapMan:35.1	:

Description

AT2G26430 (E=9e-087) RCY1, ATRCY1 | RCY1 (ARGININE-RICH CYCLIN 1); cyclin-dependent protein kinase regulator

Coordinates

chrA09:-:12701818..12708039

Molecular Weight (calculated)

69231.4 Da

IEP (calculated)

4.499

GRAVY (calculated)

-0.318

Length

622 amino acids

Sequence
(BLAST)

001: MIYTAIDNFY LTEEQLKTSP SRKDGIDEAT EVAFRIYGCD CDVIQEGGIL LNLESIDDHK QLIMATGQIV AASCVWLASK LEENPKRQDG SQGEKYSEVK
101: VELSRTERHI LNDGFCKKLG TWVNDDRDCD CKSMDEELTR YAATRIKEYM NNNRSKDEIV RILYQQHAIP VYLTLQAWDQ TEIESSGIFQ EYFVQSLLNP
201: DAETTDQGPT QIAPTSMGTA GRDTGASSSF LRVPPPTGDA LIPVQQAVSS GTAQNVPIVT SAQVPPLTGD SLSPVVQLPF LPQAVMATGQ VFSTGSSARS
301: LFPNLMLSFV CHVEHPHKFI SNYLATLETP PELRQEAWNL ANDSLRTTLC VRFRSEVVAC GVVYAAARRF QVPLPETPPW WKAFDADKSG IDQVCSVLAH
401: LYSLPKAQYI SVCKDGKTFT FSSRSGNPQA QSATKDVLPA GGDAGDTKGS AVNEFKDEVI TTPHEKATNS KKREAESNSL PIVGDSREKK IGIIDNRFDF
501: LYQATIFGVD FIVLFLWLFV VSHGSITVKT STGVFFIVYG ENYSQNYSQA QDLYNEIYGP PIYEYQVEEG GNEDLVLNNI DEVGLHVVEQ LEQTKDVPII
601: KADEVDYTKD QAFRYMDEYE KL

Best Arabidopsis Sequence Match ( AT2G26430.1 )
(BLAST)

001: MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH

Arabidopsis Description

CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.