Factsheet for TraesCS6A01G331500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G362300.1	Wheat	nucleus	98.3	98.78
TraesCS6D01G310800.2	Wheat	nucleus	97.82	98.29
Zm00001d033021_P001	Maize	cytosol	41.75	93.99
HORVU6Hr1G056640.2	Barley	plastid	18.69	90.59
HORVU6Hr1G080430.3	Barley	nucleus	94.66	87.44
Os01t0377500-01	Rice	nucleus	83.98	81.03
Zm00001d019681_P002	Maize	nucleus	41.5	80.28
KXG30252	Sorghum	nucleus	61.89	78.95
PGSC0003DMT400009464	Potato	cytosol	41.75	71.37
GSMUA_Achr8P06830_001	Banana	nucleus	69.9	64.72
Solyc01g098350.2.1	Tomato	nucleus	65.78	63.62
Bra012508.1-P	Field mustard	nucleus	61.16	61.02
CDY51595	Canola	nucleus	61.16	61.02
CDY03883	Canola	nucleus	61.41	60.67
PGSC0003DMT400057824	Potato	nucleus	65.78	60.49
KRH33999	Soybean	nucleus	65.05	59.82
KRG92800	Soybean	nucleus	64.08	59.59
AT2G26430.1	Thale cress	cytosol	59.95	59.38
VIT_12s0028g00110.t01	Wine grape	nucleus	64.56	48.81
Zm00001d033023_P001	Maize	cytosol	28.4	47.56
Bra032800.1-P	Field mustard	cytosol	45.15	29.9
CDY27590	Canola	cytosol	45.15	29.9
TraesCS5A01G057600.1	Wheat	mitochondrion	11.41	23.38
TraesCS5A01G282200.1	Wheat	peroxisome	13.11	20.93
TraesCS4A01G199300.1	Wheat	nucleus	24.03	20.93
TraesCS4A01G199600.1	Wheat	nucleus	20.87	20.67
TraesCS6A01G349600.1	Wheat	peroxisome	12.86	20.62
CDX84949	Canola	cytosol	17.23	20.23
TraesCS3A01G196600.1	Wheat	nucleus	17.48	20.22
TraesCS2A01G323500.1	Wheat	nucleus	23.3	19.71
TraesCS5A01G103900.2	Wheat	nucleus	22.82	17.87
TraesCS6A01G096600.1	Wheat	nucleus	24.03	14.04

Protein Annotations

EnsemblPlants:TraesCS6A01G331500.1	EnsemblPlantsGene:TraesCS6A01G331500	Gene3D:1.10.472.10	GO:GO:0005575	GO:GO:0006950	GO:GO:0008150
GO:GO:0009506	GO:GO:0009628	GO:GO:0009651	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_N
PANTHER:PTHR10026	PANTHER:PTHR10026:SF100	PFAM:PF00134	PIRSF:PIRSF036580	SEG:seg	SMART:SM00385
SUPFAM:SSF47954	TIGR:cd00043	MapMan:13.1.1.1.8	:	:	:

Description

No Description!

Coordinates

chr6A:-:563559000..563561993

Molecular Weight (calculated)

47519.7 Da

IEP (calculated)

9.383

GRAVY (calculated)

-0.883

Length

412 amino acids

Sequence
(BLAST)

001: MIYTAIDTFY LTDEQLRDSP SRKDGIDEAA ETTLRVYGCD LIQESGILLR LPQAVMATAQ VLFHRFYCKK SFARFSAKRV AASCVWLAGK LEESPRRSKH
101: IIFVFHRMEC RRENLPIEFL DVFSTKYTEL RHDLIRTERH LLKEMGFICH VEHPHKFISN YLATLEAPEL TQEAWNLAND SLRTTLCVRF KSEVVACGVV
201: YAAARRHRVP LPEEPPWWTV FDADEAAIQE VCRVLAHLYS LPKAQYIPVY KDNDSFSVRR ALDTHASKES PASAVASDRG TPVPSSSSQE KNSLTKAGRE
301: KVKENSDTKD KPLPTELNGK GDQAANSKSE RSEPNVDRAE ERERSRSRGR ERDRDIRGRD SDHERERDRA KRHRSRDKSS GYSDKEKSRH RSSRDRAGYY
401: SSGDKDHRHR RH

Best Arabidopsis Sequence Match ( AT2G26430.1 )
(BLAST)

001: MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH

Arabidopsis Description

CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.