Factsheet for TraesCS2A01G323500.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G358600.1	Wheat	nucleus	98.77	98.77
TraesCS2D01G339400.1	Wheat	nucleus	98.97	97.57
HORVU2Hr1G083340.2	Barley	nucleus	96.71	96.91
Zm00001d038497_P001	Maize	cytosol, extracellular, peroxisome	30.18	91.3
TraesCS4A01G199300.1	Wheat	nucleus	83.37	85.84
EES11326	Sorghum	nucleus	86.24	85.71
Zm00001d026030_P014	Maize	nucleus	84.6	84.08
EER88086	Sorghum	nucleus	74.54	76.26
TraesCS4A01G199600.1	Wheat	nucleus	64.27	75.24
Zm00001d027376_P002	Maize	nucleus, plastid	83.78	73.12
GSMUA_Achr6P30140_001	Banana	nucleus	68.99	66.27
GSMUA_Achr6P31620_001	Banana	cytosol	63.04	59.84
TraesCS5A01G103900.2	Wheat	nucleus	63.66	58.94
VIT_19s0027g01670.t01	Wine grape	nucleus	67.76	52.97
KRH50485	Soybean	nucleus	61.6	52.91
KRG89442	Soybean	nucleus	61.6	52.82
VIT_00s0125g00270.t01	Wine grape	nucleus	63.24	52.56
AT1G35440.1	Thale cress	cytosol	26.49	52.23
KRG89447	Soybean	nucleus	60.57	52.03
CDY26395	Canola	nucleus	56.06	51.9
KRH13708	Soybean	nucleus	64.48	51.82
Bra020954.1-P	Field mustard	nucleus	55.65	51.42
KRH43745	Soybean	nucleus	64.27	51.23
CDX76472	Canola	nucleus	55.44	51.04
CDY09329	Canola	nucleus	55.65	51.04
AT4G19600.1	Thale cress	nucleus	56.67	51.02
CDX71123	Canola	nucleus	27.52	50.76
CDX99359	Canola	nucleus	55.24	50.37
Bra025087.1-P	Field mustard	nucleus	58.11	49.91
Solyc10g078180.1.1	Tomato	nucleus	63.45	49.76
CDX88692	Canola	nucleus	26.69	49.24
CDX82583	Canola	nucleus	57.08	49.03
Bra021950.1-P	Field mustard	nucleus	56.26	49.02
CDY39416	Canola	nucleus	58.11	48.88
Bra006723.1-P	Field mustard	nucleus	26.49	48.86
CDY65933	Canola	nucleus	56.26	48.24
AT5G45190.2	Thale cress	nucleus	58.32	48.14
CDX99363	Canola	nucleus	38.81	46.9
CDX78940	Canola	nucleus	38.4	46.17
Bra013402.1-P	Field mustard	nucleus	38.4	46.17
CDY24526	Canola	cytosol, nucleus, peroxisome	29.77	45.89
AT4G19560.1	Thale cress	nucleus	43.12	45.65
Bra031514.1-P	Field mustard	cytosol	29.36	45.25
CDY54138	Canola	cytosol	29.36	45.25
TraesCS3A01G196600.1	Wheat	nucleus	21.36	29.21
TraesCS5A01G057600.1	Wheat	mitochondrion	11.29	27.36
TraesCS5A01G282200.1	Wheat	peroxisome	13.76	25.97
TraesCS6A01G349600.1	Wheat	peroxisome	13.35	25.29
TraesCS6A01G331500.1	Wheat	nucleus	19.71	23.3
TraesCS6A01G096600.1	Wheat	nucleus	30.6	21.13

Protein Annotations

EnsemblPlants:TraesCS2A01G323500.1	EnsemblPlantsGene:TraesCS2A01G323500	Gene3D:1.10.472.10	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:Cyclin_N
PANTHER:PTHR10026	PANTHER:PTHR10026:SF103	PFAM:PF00134	PIRSF:PIRSF036580	SEG:seg	SMART:SM00385
SUPFAM:SSF47954	TIGR:cd00043	MapMan:13.1.1.1.9	MapMan:15.3.2.1.2	:	:

Description

No Description!

Coordinates

chr2A:-:553484515..553491859

Molecular Weight (calculated)

55615.5 Da

IEP (calculated)

7.842

GRAVY (calculated)

-0.926

Length

487 amino acids

Sequence
(BLAST)

001: MDIMQTSDSS HHGIVENSPY TTPYDRRVEG DQLGASWYFS RKEIEENSLS RRDGIDLKKE SYLRKSYCTF LQDFGMRLKV PQVTIATAIV FCHRFFLRQS
101: HAKNDRQTIA TVCMFLAGKV EETPRPLKDV VLISYEIIHK KDPAAVARIK QKEVYEQQKE LLLIGERLVL VTLGFDMNVH HPYKPLVEAI KKFKVAQNAL
201: AQVAWNFVND GLRTSLCLQF KPHHIAAGAI FLAAKFLKVK LPADGEKVWW QEFDVTPRQL EEVSNQMLEL YEQNRVGPPP SQGNDTEGSS ASVVNQHAPV
301: KSEEPPAHET HQAPRQSSVP GRHGHDHPQP EKQNSNQRIP KSEARDGTTN SNEGTNMSSS MMDAMKKIDK DKVKAALEKR RKSKGDAGRK VDVMDDDDLI
401: ERELEHGVEL AAEDEKKHDR RQSWPHPAHR EDHQNTARKA ENTEEGELSL DGQEYRSPGP DNRKRKDAHE HRSNDRSAER DIKRPRP

Best Arabidopsis Sequence Match ( AT4G19600.1 )
(BLAST)

001: MAGVLAGDCS FGESGVSSYS RNSNEKQDEV ARWYFGRKEI EENSPSRLDS IDLKKETYLR KSYCTFLQDL GMRLKVPQVT IATAIIFCHR FFIRQSHARN
101: DRRTIATVCM FLAGKVEETP RPLKDVIVVS YEIIHKKDPT TAQKIKQKEV YEQQKELILN GEKIVLSTLG FDFNVYHPYK PLVEAIKKFK VAQNALAQVA
201: WNFVNDGLRT SLCLQFKPHH IAAGAIFLAA KFLKVKLPSD GEKVWWQEFD VTPRQLEDVS NQMLELYEQN RVPASQVSEV ESSVGGGSAH HVGSRPSARL
301: THEHSNSDNL GGSTKATQNR SNDNGSGEAG SVITEQKGER DTETKDSMHT ESHPAHKSRS GVEAPGEDKI EKAGAHFPED DKSRIVGTAD VTVSQSPKDI
401: KMFRDKVKAK LEAKKVQGEK TRKKDLVDED DLIERELEDV ELAVEDDKDI QNKSSMGTEH GEILDGNNLV VNTEEGEMID DVSSTMPSRK RKMESPCEKQ
501: LGEGKRRHDN SENVEEGQKT NPGGSSHSYG DREPRRHSQE R

Arabidopsis Description

CYCT1-4Cyclin-T1-4 [Source:UniProtKB/Swiss-Prot;Acc:Q8GYM6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.