Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012508.1-P | Field mustard | nucleus | 95.92 | 96.85 |
| CDY51595 | Canola | nucleus | 95.68 | 96.61 |
| AT2G26430.1 | Thale cress | cytosol | 87.05 | 87.26 |
| Zm00001d033021_P001 | Maize | cytosol | 35.25 | 80.33 |
| PGSC0003DMT400009464 | Potato | cytosol | 43.17 | 74.69 |
| KRG92800 | Soybean | nucleus | 72.18 | 67.95 |
| KRH33999 | Soybean | nucleus | 72.9 | 67.86 |
| Zm00001d019681_P002 | Maize | nucleus | 34.29 | 67.14 |
| HORVU6Hr1G056640.2 | Barley | plastid | 13.67 | 67.06 |
| Solyc01g098350.2.1 | Tomato | nucleus | 67.39 | 65.96 |
| PGSC0003DMT400057824 | Potato | nucleus | 67.87 | 63.17 |
| GSMUA_Achr8P06830_001 | Banana | nucleus | 66.19 | 62.02 |
| TraesCS6B01G362300.1 | Wheat | nucleus | 60.91 | 61.95 |
| TraesCS6D01G310800.2 | Wheat | nucleus | 60.43 | 61.46 |
| TraesCS6A01G331500.1 | Wheat | nucleus | 60.67 | 61.41 |
| Os01t0377500-01 | Rice | nucleus | 62.83 | 61.36 |
| KXG30252 | Sorghum | nucleus | 44.36 | 57.28 |
| HORVU6Hr1G080430.3 | Barley | nucleus | 58.75 | 54.93 |
| VIT_12s0028g00110.t01 | Wine grape | nucleus | 68.59 | 52.48 |
| Zm00001d019684_P002 | Maize | mitochondrion | 33.09 | 49.46 |
| Zm00001d033023_P001 | Maize | cytosol | 23.26 | 39.43 |
| CDY27590 | Canola | cytosol | 58.75 | 39.39 |
| CDX84949 | Canola | cytosol | 24.22 | 28.77 |
| CDX71123 | Canola | nucleus | 17.99 | 28.41 |
| CDX88692 | Canola | nucleus | 17.75 | 28.03 |
| CDY54138 | Canola | cytosol | 18.23 | 24.05 |
| CDY24526 | Canola | cytosol, nucleus, peroxisome | 17.75 | 23.42 |
| CDY60279 | Canola | cytosol | 17.51 | 23.32 |
| CDY03933 | Canola | cytosol | 17.51 | 23.32 |
| CDX90099 | Canola | nucleus | 17.03 | 22.05 |
| CDY11776 | Canola | cytosol | 16.79 | 21.88 |
| CDX85352 | Canola | cytosol | 11.99 | 19.84 |
| CDX78940 | Canola | nucleus | 18.94 | 19.51 |
| CDX86291 | Canola | cytosol | 11.75 | 19.44 |
| CDX99363 | Canola | nucleus | 18.7 | 19.35 |
| CDY26395 | Canola | nucleus | 24.22 | 19.2 |
| CDY51052 | Canola | cytosol | 11.51 | 19.12 |
| CDY66082 | Canola | cytosol | 11.51 | 19.05 |
| CDX99359 | Canola | nucleus | 24.22 | 18.91 |
| CDX76472 | Canola | nucleus | 23.98 | 18.9 |
| CDY09329 | Canola | nucleus | 23.98 | 18.83 |
| CDX82583 | Canola | nucleus | 24.94 | 18.34 |
| CDY51053 | Canola | cytosol | 11.03 | 18.18 |
| CDY69301 | Canola | cytosol | 11.03 | 18.18 |
| CDY39416 | Canola | nucleus | 24.7 | 17.79 |
| CDY65933 | Canola | nucleus | 24.22 | 17.78 |
| CDY05665 | Canola | endoplasmic reticulum, extracellular | 3.84 | 14.68 |
Protein Annotations
| EnsemblPlants:CDY03883 | EnsemblPlantsGene:GSBRNA2T00117366001 | Gene3D:1.10.472.10 | GO:A0A078EWD9 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf |
| InterPro:Cyclin_N | PANTHER:PTHR10026 | PANTHER:PTHR10026:SF100 | PFAM:PF00134 | PIRSF:PIRSF036580 | ProteinID:CDY03883 |
| ProteinID:CDY03883.1 | SEG:seg | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI0004EEC556 | MapMan:13.1.1.1.8 |
Description
BnaC07g11080D
Coordinates
chrLK031947:+:573056..575605
Molecular Weight (calculated)
47834.1 Da
IEP (calculated)
9.289
GRAVY (calculated)
-0.901
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MIYTAIDNFY LPEEQIKNSP SRKDGIDETT ETTLRIYGCD LIQEAGILLR LPQAVMATGQ VLFHRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLDHL DLFSKKYSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSGID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSANSQSQS ATKDVSPAVD GAVDTKGTSG SVNNESKDGK
301: NNTPHEMATD VKKSDTESNS LPIVGDSREG RSKVGESDRE KERGRERDRA SSRSHRDRGR DSDKESDRER DKLKERSHHR SRDRLKDYGD RSRHHSSRDR
401: DYRESSHSSK DRRSRHH
101: VIIVFHRMEC RRENLPLDHL DLFSKKYSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSGID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSANSQSQS ATKDVSPAVD GAVDTKGTSG SVNNESKDGK
301: NNTPHEMATD VKKSDTESNS LPIVGDSREG RSKVGESDRE KERGRERDRA SSRSHRDRGR DSDKESDRER DKLKERSHHR SRDRLKDYGD RSRHHSSRDR
401: DYRESSHSSK DRRSRHH
001: MIYTAIDNFY LSDEQLKASP SRKDGIDETT EISLRIYGCD LIQEGGILLK LPQAVMATGQ VLFQRFYCKK SLAKFDVKIV AASCVWLASK LEENPKKARQ
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH
101: VIIVFHRMEC RRENLPLEHL DMYAKKFSEL KVELSRTERH ILKEMGFVCH VEHPHKFISN YLATLETPPE LRQEAWNLAN DSLRTTLCVR FRSEVVACGV
201: VYAAARRFQV PLPENPPWWK AFDADKSSID EVCRVLAHLY SLPKAQYISV CKDGKPFTFS SRSGNSQGQS ATKDLLPGAG EAVDTKCTAG SANNDLKDGM
301: VTTPHEKATD SKKSGTESNS QPIVGDSSYE RSKVGDRERE SDREKERGRE RDRGRSHRGR DSDRDSDRER DKLKDRSHHR SRDRLKDSGG HSDKSRHHSS
401: RDRDYRDSSK DRRRHH
Arabidopsis Description
CYCL1-1Cyclin-L1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWV3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.