Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020686.1-P | Field mustard | cytosol | 99.21 | 99.21 |
| CDY51053 | Canola | cytosol | 99.21 | 99.21 |
| AT5G48630.2 | Thale cress | cytosol, nucleus, plastid | 90.51 | 89.45 |
| KRH46635 | Soybean | cytosol | 73.91 | 73.91 |
| KRG99632 | Soybean | cytosol | 73.12 | 73.12 |
| Solyc06g083260.2.1 | Tomato | cytosol, nucleus | 71.54 | 72.4 |
| PGSC0003DMT400051796 | Potato | cytosol | 71.54 | 72.4 |
| CDY66082 | Canola | cytosol | 70.75 | 71.03 |
| CDY51052 | Canola | cytosol | 70.36 | 70.92 |
| VIT_00s0360g00050.t01 | Wine grape | cytosol | 69.17 | 69.72 |
| CDX86291 | Canola | cytosol | 69.17 | 69.44 |
| CDX85352 | Canola | cytosol | 68.38 | 68.65 |
| GSMUA_Achr7P02730_001 | Banana | cytosol | 67.19 | 64.64 |
| Os09t0504400-01 | Rice | nucleus | 64.43 | 63.42 |
| CDY05665 | Canola | endoplasmic reticulum, extracellular | 26.88 | 62.39 |
| EER97007 | Sorghum | nucleus | 63.24 | 62.26 |
| TraesCS6D01G332100.1 | Wheat | peroxisome | 62.85 | 61.87 |
| TraesCS5B01G281600.1 | Wheat | peroxisome | 62.85 | 61.63 |
| TraesCS5D01G289300.2 | Wheat | peroxisome | 62.85 | 61.63 |
| TraesCS6A01G349600.1 | Wheat | peroxisome | 62.45 | 61.48 |
| TraesCS6B01G382700.1 | Wheat | peroxisome | 62.45 | 61.48 |
| TraesCS5A01G282200.1 | Wheat | peroxisome | 62.06 | 60.85 |
| TraesCS5A01G057600.1 | Wheat | mitochondrion | 46.64 | 58.71 |
| HORVU6Hr1G083890.3 | Barley | plastid | 62.85 | 52.48 |
| Zm00001d021031_P002 | Maize | endoplasmic reticulum, vacuole | 63.24 | 50.79 |
| CDX71123 | Canola | nucleus | 22.92 | 21.97 |
| CDX88692 | Canola | nucleus | 20.95 | 20.08 |
| CDY03933 | Canola | cytosol | 20.95 | 16.93 |
| CDX90099 | Canola | nucleus | 21.34 | 16.77 |
| CDY11776 | Canola | cytosol | 20.95 | 16.56 |
| CDY60279 | Canola | cytosol | 20.16 | 16.29 |
| CDY24526 | Canola | cytosol, nucleus, peroxisome | 19.76 | 15.82 |
| CDY54138 | Canola | cytosol | 18.97 | 15.19 |
| CDX99363 | Canola | nucleus | 22.53 | 14.14 |
| CDX78940 | Canola | nucleus | 22.13 | 13.83 |
| CDY26395 | Canola | nucleus | 24.11 | 11.6 |
| CDY51595 | Canola | nucleus | 18.18 | 11.14 |
| CDY03883 | Canola | nucleus | 18.18 | 11.03 |
| CDX76472 | Canola | nucleus | 22.92 | 10.96 |
| CDX82583 | Canola | nucleus | 24.51 | 10.93 |
| CDY09329 | Canola | nucleus | 22.92 | 10.92 |
| CDX99359 | Canola | nucleus | 22.92 | 10.86 |
| CDY65933 | Canola | nucleus | 24.11 | 10.74 |
| CDY39416 | Canola | nucleus | 24.51 | 10.71 |
| CDY27590 | Canola | cytosol | 15.41 | 6.27 |
| CDX84949 | Canola | cytosol | 5.93 | 4.27 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.3 | MapMan:15.3.3.4.4 | UniProt:A0A078JUR1 | EnsemblPlants:CDY69301 | ProteinID:CDY69301 |
| ProteinID:CDY69301.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:CyclinC/Ssn8 | InterPro:Cyclin_N | GO:GO:0003674 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016538 | GO:GO:0016592 | GO:GO:0019538 |
| GO:GO:0030234 | GO:GO:0045859 | EnsemblPlantsGene:GSBRNA2T00086548001 | PFAM:PF00134 | PIRSF:PIRSF028758 | PANTHER:PTHR10026 |
| PANTHER:PTHR10026:SF7 | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI0001CA9E92 | : | : |
Description
BnaC02g48270DBnaC02g48270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JUR1]
Coordinates
chrLK039082:-:552..2185
Molecular Weight (calculated)
29825.3 Da
IEP (calculated)
7.116
GRAVY (calculated)
-0.170
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNFWTSTH YKELKDPEEI NVVHPLDAQR GISLEDFRLI KLHMSNYISK LAQHIKIRQR VVATAVTYMR RVYTRKSLTE YEPRLVAPTC LYLACKAEES
101: VVHAKILVFY IKKLYADEKF RYEIKDILEM EMKVLEALNF YLVVFHPYRS LPEYLQDSGL NDTSMTHLTW GLVNDTYKMD LILTHPPHLI TIACIYVASV
201: YKERDIKTWF EELSADMNIV KNIAMEILDF YENHRMFTEE RVHAAFNKLA TSP
101: VVHAKILVFY IKKLYADEKF RYEIKDILEM EMKVLEALNF YLVVFHPYRS LPEYLQDSGL NDTSMTHLTW GLVNDTYKMD LILTHPPHLI TIACIYVASV
201: YKERDIKTWF EELSADMNIV KNIAMEILDF YENHRMFTEE RVHAAFNKLA TSP
001: MASNFWTSTH YKELKDPEEV NVVHPLDAQR GISVEDFRLI KLHMSNYISK LAQHIKIRQR VVATAVTYMR RVYTRKSLTE YEPRLVAPTC LYLACKAEES
101: VVHAKLLVFY MKKLYADEKF RYEIKDILEM EMKVLEALNF YLVVFHPYRS LPEFLQDSGI NDTSMTHLTW GLVNDTYRMD LILIHPPFLI TLACIYIASV
201: HKEKDIKTWF EELSVDMNIV KNIAMEILDF YENHRLFTEE RVHAAFNKLA TNP
101: VVHAKLLVFY MKKLYADEKF RYEIKDILEM EMKVLEALNF YLVVFHPYRS LPEFLQDSGI NDTSMTHLTW GLVNDTYRMD LILIHPPFLI TLACIYIASV
201: HKEKDIKTWF EELSVDMNIV KNIAMEILDF YENHRLFTEE RVHAAFNKLA TNP
Arabidopsis Description
Cyclin family protein [Source:UniProtKB/TrEMBL;Acc:F4K359]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.