CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46635	Soybean	cytosol	97.23	97.23
VIT_00s0360g00050.t01	Wine grape	cytosol	82.21	82.87
PGSC0003DMT400051796	Potato	cytosol	79.84	80.8
Solyc06g083260.2.1	Tomato	cytosol, nucleus	79.84	80.8
CDX86291	Canola	cytosol	75.49	75.79
AT5G48640.1	Thale cress	cytosol	75.49	75.49
Bra037473.1-P	Field mustard	mitochondrion	62.06	75.12
CDX85352	Canola	cytosol	74.31	74.6
CDY66082	Canola	cytosol	73.91	74.21
CDY51052	Canola	cytosol	73.52	74.1
Bra020686.1-P	Field mustard	cytosol	73.91	73.91
CDY51053	Canola	cytosol	73.91	73.91
CDY69301	Canola	cytosol	73.12	73.12
GSMUA_Achr7P02730_001	Banana	cytosol	75.89	73.0
TraesCS5D01G289300.2	Wheat	peroxisome	74.31	72.87
TraesCS5B01G281600.1	Wheat	peroxisome	74.31	72.87
Os09t0504400-01	Rice	nucleus	73.91	72.76
TraesCS5A01G282200.1	Wheat	peroxisome	73.91	72.48
EER97007	Sorghum	nucleus	73.52	72.37
TraesCS6A01G349600.1	Wheat	peroxisome	73.12	71.98
TraesCS6D01G332100.1	Wheat	peroxisome	72.73	71.6
Bra020685.1-P	Field mustard	cytosol	54.94	71.28
TraesCS6B01G382700.1	Wheat	peroxisome	72.33	71.21
AT5G48630.2	Thale cress	cytosol, nucleus, plastid	71.15	70.31
TraesCS5A01G057600.1	Wheat	mitochondrion	55.73	70.15
HORVU6Hr1G083890.3	Barley	plastid	72.73	60.73
Zm00001d021031_P002	Maize	endoplasmic reticulum, vacuole	73.91	59.37
CDY05665	Canola	endoplasmic reticulum, extracellular	23.32	54.13
KRH35545	Soybean	nucleus	20.16	13.71
KRG91263	Soybean	nucleus	20.16	13.6
KRH27619	Soybean	cytosol	19.76	13.44
KRH50485	Soybean	nucleus	26.09	11.64
KRG92800	Soybean	nucleus	20.16	11.51
KRG89442	Soybean	nucleus	25.3	11.27
KRH33999	Soybean	nucleus	19.76	11.16
KRH43745	Soybean	nucleus	26.88	11.13
KRH13708	Soybean	nucleus	26.48	11.06
KRG89447	Soybean	nucleus	24.51	10.93

Protein Annotations

Gene3D:1.10.472.10	EntrezGene:100784345	MapMan:13.1.1.1.3	MapMan:15.3.3.4.4	EMBL:ACUP02011234	InterPro:Cyclin-like
InterPro:Cyclin-like_sf	InterPro:CyclinC/Ssn8	InterPro:Cyclin_N	EnsemblPlantsGene:GLYMA_18G159000	GO:GO:0000307	GO:GO:0003674
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0006139
GO:GO:0006464	GO:GO:0007049	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016538	GO:GO:0016592	GO:GO:0019538	GO:GO:0030234	GO:GO:0045737	GO:GO:0045859
GO:GO:0045944	GO:GO:1901409	UniProt:I1N1Z8	EnsemblPlants:KRG99632	ProteinID:KRG99632	ProteinID:KRG99632.1
PFAM:PF00134	PIRSF:PIRSF028758	PANTHER:PTHR10026	PANTHER:PTHR10026:SF7	SMART:SM00385	SUPFAM:SSF47954
UniParc:UPI000233ECA9	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:35959904..35971623

Molecular Weight (calculated)

29847.5 Da

IEP (calculated)

7.141

GRAVY (calculated)

-0.177

Length

253 amino acids

Sequence
(BLAST)

001: MAANFWTSSH YKHLLDQEDV DMVNPLDKEK GITLEDFKLI KMHMANYILK LAQQVKVRQR VVATAITYMR RVYTRKSMTE YDPRLVAPTC LYLASKAEES
101: TVQARLLVFY IKKLYTDDKY RYEIKDILEM EMKILEALNY YLVVYHPYRS LSPLLQDAGL NDLNMTQLTW GFVNDTYKMD LILVHPPHLI ALACIYIASV
201: LREKDTTAWF EELRVDMNVV KNISMEILDF YESNRMFTDE RINSALQKLS LRP

Best Arabidopsis Sequence Match ( AT5G48630.1 )
(BLAST)

001: MASNFWTSTH YKELKDPEEV NVVHPLDAQR GISVEDFRLI KLHMSNYISK LAQHIKIRQR VVATAVTYMR RVYTRKSLTE YEPRLVAPTC LYLACKAEES
101: VVHAKLLVFY MKKLYADEKF RYEIKDILEM EMKVLEALNF YLVVFHPYRS LPEFLQDSGI NDTSMTHLTW GLVNDTYRMD LILIHPPFLI TLACIYIASV
201: HKEKDIKTWF EELSVDMNIV KNIAMEILDF YENHRLFTEE RVHAAFNKLA TNP

Arabidopsis Description

Cyclin family protein [Source:UniProtKB/TrEMBL;Acc:F4K359]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.