Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY66082 | Canola | cytosol | 98.8 | 98.41 |
Bra020685.1-P | Field mustard | cytosol | 76.1 | 97.95 |
AT5G48640.1 | Thale cress | cytosol | 90.84 | 90.12 |
CDX85352 | Canola | cytosol | 87.65 | 87.3 |
CDX86291 | Canola | cytosol | 87.65 | 87.3 |
KRG99632 | Soybean | cytosol | 74.1 | 73.52 |
KRH46635 | Soybean | cytosol | 74.1 | 73.52 |
PGSC0003DMT400051796 | Potato | cytosol | 71.71 | 72.0 |
Solyc06g083260.2.1 | Tomato | cytosol, nucleus | 71.71 | 72.0 |
CDY51053 | Canola | cytosol | 71.71 | 71.15 |
VIT_00s0360g00050.t01 | Wine grape | cytosol | 70.92 | 70.92 |
CDY69301 | Canola | cytosol | 70.92 | 70.36 |
Os09t0504400-01 | Rice | nucleus | 65.74 | 64.2 |
EER97007 | Sorghum | nucleus | 65.34 | 63.81 |
TraesCS5B01G281600.1 | Wheat | peroxisome | 64.94 | 63.18 |
TraesCS5D01G289300.2 | Wheat | peroxisome | 64.94 | 63.18 |
GSMUA_Achr7P02730_001 | Banana | cytosol | 65.74 | 62.74 |
TraesCS6D01G332100.1 | Wheat | peroxisome | 64.14 | 62.65 |
TraesCS5A01G282200.1 | Wheat | peroxisome | 64.14 | 62.4 |
TraesCS6A01G349600.1 | Wheat | peroxisome | 63.74 | 62.26 |
TraesCS6B01G382700.1 | Wheat | peroxisome | 63.74 | 62.26 |
TraesCS5A01G057600.1 | Wheat | mitochondrion | 47.01 | 58.71 |
HORVU6Hr1G083890.3 | Barley | plastid | 64.14 | 53.14 |
Zm00001d021031_P002 | Maize | endoplasmic reticulum, vacuole | 64.94 | 51.75 |
CDY05665 | Canola | endoplasmic reticulum, extracellular | 22.31 | 51.38 |
CDX71123 | Canola | nucleus | 22.31 | 21.21 |
CDX88692 | Canola | nucleus | 21.51 | 20.45 |
CDY03933 | Canola | cytosol | 20.32 | 16.29 |
CDY60279 | Canola | cytosol | 20.32 | 16.29 |
CDY11776 | Canola | cytosol | 20.32 | 15.94 |
CDX90099 | Canola | nucleus | 20.32 | 15.84 |
CDY24526 | Canola | cytosol, nucleus, peroxisome | 19.12 | 15.19 |
CDX99363 | Canola | nucleus | 23.51 | 14.64 |
CDY54138 | Canola | cytosol | 18.33 | 14.56 |
CDX78940 | Canola | nucleus | 23.11 | 14.32 |
CDY26395 | Canola | nucleus | 25.1 | 11.98 |
CDY51595 | Canola | nucleus | 19.12 | 11.62 |
CDY03883 | Canola | nucleus | 19.12 | 11.51 |
CDY65933 | Canola | nucleus | 25.1 | 11.09 |
CDX76472 | Canola | nucleus | 23.11 | 10.96 |
CDX82583 | Canola | nucleus | 24.7 | 10.93 |
CDY09329 | Canola | nucleus | 23.11 | 10.92 |
CDY39416 | Canola | nucleus | 24.7 | 10.71 |
CDX99359 | Canola | nucleus | 22.31 | 10.49 |
CDY27590 | Canola | cytosol | 15.54 | 6.27 |
CDX84949 | Canola | cytosol | 5.58 | 3.99 |
Protein Annotations
Gene3D:1.10.472.10 | MapMan:13.1.1.1.3 | MapMan:15.3.3.4.4 | UniProt:A0A078IM98 | EnsemblPlants:CDY51052 | ProteinID:CDY51052 |
ProteinID:CDY51052.1 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:CyclinC/Ssn8 | InterPro:Cyclin_N | GO:GO:0003674 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006464 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016538 | GO:GO:0016592 | GO:GO:0019538 |
GO:GO:0030234 | GO:GO:0045859 | EnsemblPlantsGene:GSBRNA2T00098092001 | PFAM:PF00134 | PIRSF:PIRSF028758 | PANTHER:PTHR10026 |
PANTHER:PTHR10026:SF7 | SMART:SM00385 | SUPFAM:SSF47954 | UniParc:UPI0004EEAE16 | : | : |
Description
BnaA02g30360DBnaA02g30360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IM98]
Coordinates
chrLK032961:+:6689..8917
Molecular Weight (calculated)
29611.0 Da
IEP (calculated)
6.607
GRAVY (calculated)
-0.145
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MAANFWTSSH YKQLMEQEEV DVVHPLDKER GISVEDFKLI KFHMSNHMIK LAQHIKVRQR VVATAVTYMR RVYTRKSMVE FEPRLVALAC MYLASKAEES
101: IVQARNIIFY IRKLYPDEYK YELKDVLGME MKVLEALNYY LVFHPYRSLS EFLQDAAIND VNMNQITWGI VNDTYKMDLI LVHPPYRIAL ACIYIASVHT
201: EKDITAWFED LHEDMNLVKN IAMEILDFYE NYRSITEEKV NSAFSKLALK P
101: IVQARNIIFY IRKLYPDEYK YELKDVLGME MKVLEALNYY LVFHPYRSLS EFLQDAAIND VNMNQITWGI VNDTYKMDLI LVHPPYRIAL ACIYIASVHT
201: EKDITAWFED LHEDMNLVKN IAMEILDFYE NYRSITEEKV NSAFSKLALK P
001: MAANFWNSSH YKQLLDPEEV DVVHDLDKER GISIDDFKLI KFHMSNHIMK LAQHIKVRQR VVATAITYMR RVYIRKSMVE FEPRLVALTC LYLASKAEES
101: IVQARNLVFY IKRLYPDEYN KYELKDILGM EMKVLEALDY YLVVFHPYRS LSEFLQDAAL NDVNMNQITW GIVNDTYKMD LILVHPPYRI ALACIYIASV
201: HREKDITAWF EDLHEDMNLV KNIAMEILDF YENYRTITEE KVNSAFSKLA LKL
101: IVQARNLVFY IKRLYPDEYN KYELKDILGM EMKVLEALDY YLVVFHPYRS LSEFLQDAAL NDVNMNQITW GIVNDTYKMD LILVHPPYRI ALACIYIASV
201: HREKDITAWF EDLHEDMNLV KNIAMEILDF YENYRTITEE KVNSAFSKLA LKL
Arabidopsis Description
CYCC1-1Cyclin-C1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.