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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY66082 Canola cytosol 98.8 98.41
Bra020685.1-P Field mustard cytosol 76.1 97.95
AT5G48640.1 Thale cress cytosol 90.84 90.12
CDX85352 Canola cytosol 87.65 87.3
CDX86291 Canola cytosol 87.65 87.3
KRG99632 Soybean cytosol 74.1 73.52
KRH46635 Soybean cytosol 74.1 73.52
PGSC0003DMT400051796 Potato cytosol 71.71 72.0
Solyc06g083260.2.1 Tomato cytosol, nucleus 71.71 72.0
CDY51053 Canola cytosol 71.71 71.15
VIT_00s0360g00050.t01 Wine grape cytosol 70.92 70.92
CDY69301 Canola cytosol 70.92 70.36
Os09t0504400-01 Rice nucleus 65.74 64.2
EER97007 Sorghum nucleus 65.34 63.81
TraesCS5B01G281600.1 Wheat peroxisome 64.94 63.18
TraesCS5D01G289300.2 Wheat peroxisome 64.94 63.18
GSMUA_Achr7P02730_001 Banana cytosol 65.74 62.74
TraesCS6D01G332100.1 Wheat peroxisome 64.14 62.65
TraesCS5A01G282200.1 Wheat peroxisome 64.14 62.4
TraesCS6A01G349600.1 Wheat peroxisome 63.74 62.26
TraesCS6B01G382700.1 Wheat peroxisome 63.74 62.26
TraesCS5A01G057600.1 Wheat mitochondrion 47.01 58.71
HORVU6Hr1G083890.3 Barley plastid 64.14 53.14
Zm00001d021031_P002 Maize endoplasmic reticulum, vacuole 64.94 51.75
CDY05665 Canola endoplasmic reticulum, extracellular 22.31 51.38
CDX71123 Canola nucleus 22.31 21.21
CDX88692 Canola nucleus 21.51 20.45
CDY03933 Canola cytosol 20.32 16.29
CDY60279 Canola cytosol 20.32 16.29
CDY11776 Canola cytosol 20.32 15.94
CDX90099 Canola nucleus 20.32 15.84
CDY24526 Canola cytosol, nucleus, peroxisome 19.12 15.19
CDX99363 Canola nucleus 23.51 14.64
CDY54138 Canola cytosol 18.33 14.56
CDX78940 Canola nucleus 23.11 14.32
CDY26395 Canola nucleus 25.1 11.98
CDY51595 Canola nucleus 19.12 11.62
CDY03883 Canola nucleus 19.12 11.51
CDY65933 Canola nucleus 25.1 11.09
CDX76472 Canola nucleus 23.11 10.96
CDX82583 Canola nucleus 24.7 10.93
CDY09329 Canola nucleus 23.11 10.92
CDY39416 Canola nucleus 24.7 10.71
CDX99359 Canola nucleus 22.31 10.49
CDY27590 Canola cytosol 15.54 6.27
CDX84949 Canola cytosol 5.58 3.99
Protein Annotations
Gene3D:1.10.472.10MapMan:13.1.1.1.3MapMan:15.3.3.4.4UniProt:A0A078IM98EnsemblPlants:CDY51052ProteinID:CDY51052
ProteinID:CDY51052.1InterPro:Cyclin-likeInterPro:Cyclin-like_sfInterPro:CyclinC/Ssn8InterPro:Cyclin_NGO:GO:0003674
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0005654GO:GO:0006464
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016538GO:GO:0016592GO:GO:0019538
GO:GO:0030234GO:GO:0045859EnsemblPlantsGene:GSBRNA2T00098092001PFAM:PF00134PIRSF:PIRSF028758PANTHER:PTHR10026
PANTHER:PTHR10026:SF7SMART:SM00385SUPFAM:SSF47954UniParc:UPI0004EEAE16::
Description
BnaA02g30360DBnaA02g30360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IM98]
Coordinates
chrLK032961:+:6689..8917
Molecular Weight (calculated)
29611.0 Da
IEP (calculated)
6.607
GRAVY (calculated)
-0.145
Length
251 amino acids
Sequence
(BLAST)
001: MAANFWTSSH YKQLMEQEEV DVVHPLDKER GISVEDFKLI KFHMSNHMIK LAQHIKVRQR VVATAVTYMR RVYTRKSMVE FEPRLVALAC MYLASKAEES
101: IVQARNIIFY IRKLYPDEYK YELKDVLGME MKVLEALNYY LVFHPYRSLS EFLQDAAIND VNMNQITWGI VNDTYKMDLI LVHPPYRIAL ACIYIASVHT
201: EKDITAWFED LHEDMNLVKN IAMEILDFYE NYRSITEEKV NSAFSKLALK P
Best Arabidopsis Sequence Match ( AT5G48640.1 )
(BLAST)
001: MAANFWNSSH YKQLLDPEEV DVVHDLDKER GISIDDFKLI KFHMSNHIMK LAQHIKVRQR VVATAITYMR RVYIRKSMVE FEPRLVALTC LYLASKAEES
101: IVQARNLVFY IKRLYPDEYN KYELKDILGM EMKVLEALDY YLVVFHPYRS LSEFLQDAAL NDVNMNQITW GIVNDTYKMD LILVHPPYRI ALACIYIASV
201: HREKDITAWF EDLHEDMNLV KNIAMEILDF YENYRTITEE KVNSAFSKLA LKL
Arabidopsis Description
CYCC1-1Cyclin-C1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.