Factsheet for TraesCS6D01G332100.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	nucleus, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G382700.1	Wheat	peroxisome	99.22	99.22
TraesCS6A01G349600.1	Wheat	peroxisome	99.22	99.22
EER97007	Sorghum	nucleus	93.0	93.0
Os09t0504400-01	Rice	nucleus	92.22	92.22
TraesCS5D01G289300.2	Wheat	peroxisome	92.22	91.86
HORVU6Hr1G083890.3	Barley	plastid	99.22	84.16
GSMUA_Achr7P02730_001	Banana	cytosol	80.93	79.09
Zm00001d021031_P002	Maize	endoplasmic reticulum, vacuole	93.0	75.87
VIT_00s0360g00050.t01	Wine grape	cytosol	72.76	74.5
KRH46635	Soybean	cytosol	71.98	73.12
KRG99632	Soybean	cytosol	71.6	72.73
PGSC0003DMT400051796	Potato	cytosol	70.43	72.4
Solyc06g083260.2.1	Tomato	cytosol, nucleus	70.43	72.4
AT5G48640.1	Thale cress	cytosol	65.37	66.4
Bra037473.1-P	Field mustard	mitochondrion	53.31	65.55
CDX86291	Canola	cytosol	64.2	65.48
CDY66082	Canola	cytosol	63.42	64.68
CDX85352	Canola	cytosol	63.03	64.29
CDY51052	Canola	cytosol	62.65	64.14
AT5G48630.2	Thale cress	cytosol, nucleus, plastid	63.03	63.28
CDY69301	Canola	cytosol	61.87	62.85
Bra020686.1-P	Field mustard	cytosol	61.87	62.85
CDY51053	Canola	cytosol	61.87	62.85
Bra020685.1-P	Field mustard	cytosol	46.3	61.03
CDY05665	Canola	endoplasmic reticulum, extracellular	21.4	50.46
TraesCS3D01G199600.2	Wheat	nucleus	21.4	15.45
TraesCS4D01G113400.1	Wheat	nucleus	24.12	13.96
TraesCS4D01G113600.1	Wheat	nucleus	26.07	13.96
TraesCS2D01G339400.1	Wheat	nucleus	25.68	13.36
TraesCS6D01G310800.2	Wheat	nucleus	20.62	12.93
TraesCS5D01G121900.1	Wheat	nucleus	26.85	12.32
TraesCS6D01G087700.1	Wheat	nucleus	21.79	6.7

Protein Annotations

Gene3D:1.10.472.10	MapMan:13.1.1.1.3	MapMan:15.3.3.4.4	InterPro:Cyclin-like	InterPro:Cyclin-like_sf	InterPro:CyclinC/Ssn8
InterPro:Cyclin_N	GO:GO:0003674	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005654	GO:GO:0016538	GO:GO:0016592	GO:GO:0030234	PFAM:PF00134	PIRSF:PIRSF028758
PANTHER:PTHR10026	PANTHER:PTHR10026:SF7	SMART:SM00385	SUPFAM:SSF47954	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G332100
EnsemblPlants:TraesCS6D01G332100.1	TIGR:cd00043	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:434507950..434511950

Molecular Weight (calculated)

30115.9 Da

IEP (calculated)

6.935

GRAVY (calculated)

-0.079

Length

257 amino acids

Sequence
(BLAST)

001: MAANFWTSSH SKQLLDPEEV DVVPAADRER GVTPVEFRLV KIHMSFHIWR LAQQVKVRQR VIATAITYFR RVYTRKSMTE YDPRLVAPAC LYLASKVEES
101: TVQARLLVFY IKKMCGSDDK YRFEIKDILE MEMKLLEALD YYLVVYHPYR PLLQLLQDAG ITDLTQFAWG LVNDTYKMDL ILIYPPYMIA LACIYIASVL
201: KDKDTTSWFE ELRVDMNIVK NISMEILDFY DTYKIDPQRG LQEDKIIPVM NKLPSKA

Best Arabidopsis Sequence Match ( AT5G48630.1 )
(BLAST)

001: MASNFWTSTH YKELKDPEEV NVVHPLDAQR GISVEDFRLI KLHMSNYISK LAQHIKIRQR VVATAVTYMR RVYTRKSLTE YEPRLVAPTC LYLACKAEES
101: VVHAKLLVFY MKKLYADEKF RYEIKDILEM EMKVLEALNF YLVVFHPYRS LPEFLQDSGI NDTSMTHLTW GLVNDTYRMD LILIHPPFLI TLACIYIASV
201: HKEKDIKTWF EELSVDMNIV KNIAMEILDF YENHRLFTEE RVHAAFNKLA TNP

Arabidopsis Description

Cyclin family protein [Source:UniProtKB/TrEMBL;Acc:F4K359]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.