Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020686.1-P | Field mustard | cytosol | 89.45 | 90.51 |
| CDY51053 | Canola | cytosol | 89.45 | 90.51 |
| CDY69301 | Canola | cytosol | 89.45 | 90.51 |
| Solyc06g083260.2.1 | Tomato | cytosol, nucleus | 71.09 | 72.8 |
| PGSC0003DMT400051796 | Potato | cytosol | 71.09 | 72.8 |
| KRH46635 | Soybean | cytosol | 71.09 | 71.94 |
| AT5G48640.1 | Thale cress | cytosol | 70.31 | 71.15 |
| KRG99632 | Soybean | cytosol | 70.31 | 71.15 |
| VIT_00s0360g00050.t01 | Wine grape | cytosol | 67.97 | 69.32 |
| GSMUA_Achr7P02730_001 | Banana | cytosol | 66.02 | 64.26 |
| Os09t0504400-01 | Rice | nucleus | 64.06 | 63.81 |
| EER97007 | Sorghum | nucleus | 63.28 | 63.03 |
| TraesCS6D01G332100.1 | Wheat | peroxisome | 63.28 | 63.03 |
| TraesCS6A01G349600.1 | Wheat | peroxisome | 62.89 | 62.65 |
| TraesCS6B01G382700.1 | Wheat | peroxisome | 62.89 | 62.65 |
| TraesCS5D01G289300.2 | Wheat | peroxisome | 62.89 | 62.4 |
| TraesCS5B01G281600.1 | Wheat | peroxisome | 62.89 | 62.4 |
| TraesCS5A01G282200.1 | Wheat | peroxisome | 62.11 | 61.63 |
| TraesCS5A01G057600.1 | Wheat | mitochondrion | 47.66 | 60.7 |
| HORVU6Hr1G083890.3 | Barley | plastid | 63.67 | 53.8 |
| Zm00001d021031_P002 | Maize | endoplasmic reticulum, vacuole | 63.28 | 51.43 |
| AT1G35440.1 | Thale cress | cytosol | 23.44 | 24.29 |
| AT1G27630.1 | Thale cress | cytosol | 19.92 | 16.09 |
| AT4G19560.1 | Thale cress | nucleus | 22.66 | 12.61 |
| AT2G26430.1 | Thale cress | cytosol | 17.19 | 10.58 |
| AT4G19600.1 | Thale cress | nucleus | 22.27 | 10.54 |
| AT5G45190.2 | Thale cress | nucleus | 24.22 | 10.51 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.3 | MapMan:15.3.3.4.4 | EntrezGene:834920 | ProteinID:AED95700.1 | ArrayExpress:AT5G48630 |
| EnsemblPlantsGene:AT5G48630 | RefSeq:AT5G48630 | TAIR:AT5G48630 | RefSeq:AT5G48630-TAIR-G | EnsemblPlants:AT5G48630.2 | TAIR:AT5G48630.2 |
| Unigene:At.43480 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:CyclinC/Ssn8 | InterPro:Cyclin_N | UniProt:F4K359 |
| GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016538 | GO:GO:0016592 |
| GO:GO:0019538 | GO:GO:0030234 | GO:GO:0045859 | RefSeq:NP_001190493.1 | PFAM:PF00134 | PIRSF:PIRSF028758 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR10026 | PANTHER:PTHR10026:SF7 | SMART:SM00385 |
| SUPFAM:SSF47954 | TMHMM:TMhelix | UniParc:UPI0001E93126 | : | : | : |
Description
Cyclin family protein [Source:UniProtKB/TrEMBL;Acc:F4K359]
Coordinates
chr5:-:19721503..19723168
Molecular Weight (calculated)
30215.9 Da
IEP (calculated)
6.909
GRAVY (calculated)
-0.045
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLIDSFCGF YFHSKELKDP EEVNVVHPLD AQRGISVEDF RLIKLHMSNY ISKLAQHIKI RQRVVATAVT YMRRVYTRKS LTEYEPRLVA PTCLYLACKA
101: EESVVHAKLL VFYMKKLYAD EKFRYEIKDI LEMEMKVLEA LNFYLVVFHP YRSLPEFLQD SGINDTSMTH LTWGLVNDTY RMDLILIHPP FLITLACIYI
201: ASVHKEKDIK TWFEELSVDM NIVKNIAMEI LDFYENHRLF TEERVHAAFN KLATNP
101: EESVVHAKLL VFYMKKLYAD EKFRYEIKDI LEMEMKVLEA LNFYLVVFHP YRSLPEFLQD SGINDTSMTH LTWGLVNDTY RMDLILIHPP FLITLACIYI
201: ASVHKEKDIK TWFEELSVDM NIVKNIAMEI LDFYENHRLF TEERVHAAFN KLATNP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.