Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037473.1-P | Field mustard | mitochondrion | 77.08 | 93.3 |
| CDX86291 | Canola | cytosol | 91.3 | 91.67 |
| CDY66082 | Canola | cytosol | 90.51 | 90.87 |
| CDX85352 | Canola | cytosol | 90.51 | 90.87 |
| CDY51052 | Canola | cytosol | 90.12 | 90.84 |
| Bra020685.1-P | Field mustard | cytosol | 69.96 | 90.77 |
| KRG99632 | Soybean | cytosol | 75.49 | 75.49 |
| KRH46635 | Soybean | cytosol | 75.1 | 75.1 |
| Solyc06g083260.2.1 | Tomato | cytosol, nucleus | 73.91 | 74.8 |
| PGSC0003DMT400051796 | Potato | cytosol | 73.91 | 74.8 |
| VIT_00s0360g00050.t01 | Wine grape | cytosol | 71.94 | 72.51 |
| AT5G48630.2 | Thale cress | cytosol, nucleus, plastid | 71.15 | 70.31 |
| TraesCS5D01G289300.2 | Wheat | peroxisome | 67.59 | 66.28 |
| TraesCS5B01G281600.1 | Wheat | peroxisome | 67.59 | 66.28 |
| EER97007 | Sorghum | nucleus | 67.19 | 66.15 |
| Os09t0504400-01 | Rice | nucleus | 66.8 | 65.76 |
| TraesCS5A01G282200.1 | Wheat | peroxisome | 66.8 | 65.5 |
| GSMUA_Achr7P02730_001 | Banana | cytosol | 67.98 | 65.4 |
| TraesCS6D01G332100.1 | Wheat | peroxisome | 66.4 | 65.37 |
| TraesCS6A01G349600.1 | Wheat | peroxisome | 66.01 | 64.98 |
| TraesCS6B01G382700.1 | Wheat | peroxisome | 66.01 | 64.98 |
| TraesCS5A01G057600.1 | Wheat | mitochondrion | 48.22 | 60.7 |
| HORVU6Hr1G083890.3 | Barley | plastid | 66.8 | 55.78 |
| Zm00001d021031_P002 | Maize | endoplasmic reticulum, vacuole | 67.59 | 54.29 |
| AT1G35440.1 | Thale cress | cytosol | 22.13 | 22.67 |
| AT1G27630.1 | Thale cress | cytosol | 20.16 | 16.09 |
| AT4G19560.1 | Thale cress | nucleus | 23.32 | 12.83 |
| AT2G26430.1 | Thale cress | cytosol | 20.16 | 12.26 |
| AT4G19600.1 | Thale cress | nucleus | 22.92 | 10.72 |
| AT5G45190.2 | Thale cress | nucleus | 24.11 | 10.34 |
Protein Annotations
| Gene3D:1.10.472.10 | MapMan:13.1.1.1.3 | MapMan:15.3.3.4.4 | EntrezGene:834921 | ProteinID:AED95701.1 | ArrayExpress:AT5G48640 |
| EnsemblPlantsGene:AT5G48640 | RefSeq:AT5G48640 | TAIR:AT5G48640 | RefSeq:AT5G48640-TAIR-G | EnsemblPlants:AT5G48640.1 | TAIR:AT5G48640.1 |
| ProteinID:BAB10697.1 | EMBL:BX833973 | InterPro:Cyclin-like | InterPro:Cyclin-like_sf | InterPro:CyclinC/Ssn8 | InterPro:Cyclin_N |
| GO:GO:0000307 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006464 | GO:GO:0007049 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016538 | GO:GO:0016592 | GO:GO:0019538 | GO:GO:0030234 |
| GO:GO:0045737 | GO:GO:0045859 | GO:GO:0045944 | GO:GO:0051301 | GO:GO:1901409 | RefSeq:NP_199675.2 |
| PFAM:PF00134 | PIRSF:PIRSF028758 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR10026 | PANTHER:PTHR10026:SF7 | UniProt:Q9FJK6 | SMART:SM00385 |
| SUPFAM:SSF47954 | UniParc:UPI000034F2DA | : | : | : | : |
Description
CYCC1-1Cyclin-C1-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJK6]
Coordinates
chr5:-:19723404..19725748
Molecular Weight (calculated)
29916.4 Da
IEP (calculated)
6.425
GRAVY (calculated)
-0.123
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MAANFWNSSH YKQLLDPEEV DVVHDLDKER GISIDDFKLI KFHMSNHIMK LAQHIKVRQR VVATAITYMR RVYIRKSMVE FEPRLVALTC LYLASKAEES
101: IVQARNLVFY IKRLYPDEYN KYELKDILGM EMKVLEALDY YLVVFHPYRS LSEFLQDAAL NDVNMNQITW GIVNDTYKMD LILVHPPYRI ALACIYIASV
201: HREKDITAWF EDLHEDMNLV KNIAMEILDF YENYRTITEE KVNSAFSKLA LKL
101: IVQARNLVFY IKRLYPDEYN KYELKDILGM EMKVLEALDY YLVVFHPYRS LSEFLQDAAL NDVNMNQITW GIVNDTYKMD LILVHPPYRI ALACIYIASV
201: HREKDITAWF EDLHEDMNLV KNIAMEILDF YENYRTITEE KVNSAFSKLA LKL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.