Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G245600.1 | Wheat | cytosol | 98.35 | 98.58 |
| TraesCS1D01G245300.1 | Wheat | cytosol | 98.35 | 98.58 |
| TraesCS1B01G256600.1 | Wheat | cytosol | 97.65 | 97.88 |
| Zm00001d010476_P001 | Maize | cytosol | 82.82 | 82.24 |
| EES18176 | Sorghum | cytosol | 82.59 | 82.01 |
| Zm00001d038109_P002 | Maize | cytosol | 80.24 | 79.3 |
| VIT_14s0006g02280.t01 | Wine grape | cytosol | 64.24 | 78.67 |
| KRH41782 | Soybean | cytosol, nucleus | 65.88 | 77.14 |
| VIT_17s0000g02960.t01 | Wine grape | cytosol | 74.82 | 75.36 |
| KRH39114 | Soybean | nucleus | 72.24 | 74.7 |
| KRH48600 | Soybean | cytosol | 69.88 | 74.06 |
| PGSC0003DMT400032131 | Potato | cytosol | 72.71 | 73.75 |
| Solyc08g081280.2.1 | Tomato | cytosol, nucleus | 72.24 | 73.27 |
| KRH60482 | Soybean | cytosol | 70.12 | 72.86 |
| CDY21722 | Canola | cytosol | 66.35 | 72.49 |
| CDX96131 | Canola | cytosol | 59.06 | 72.33 |
| CDY36228 | Canola | cytosol | 59.06 | 72.33 |
| CDX81858 | Canola | cytosol | 66.12 | 72.24 |
| AT1G18040.1 | Thale cress | cytosol | 66.35 | 72.12 |
| Bra031013.1-P | Field mustard | cytosol | 63.76 | 71.88 |
| AT1G66750.1 | Thale cress | cytosol | 58.82 | 71.84 |
| CDX96739 | Canola | cytosol | 66.12 | 71.5 |
| Bra016572.1-P | Field mustard | cytosol | 65.88 | 71.25 |
| AT1G73690.1 | Thale cress | cytosol | 66.12 | 70.6 |
| GSMUA_Achr3P09020_001 | Banana | cytosol | 77.88 | 70.13 |
| CDX83876 | Canola | cytosol | 65.18 | 70.13 |
| Bra015974.1-P | Field mustard | cytosol | 64.0 | 68.51 |
| CDX73001 | Canola | cytosol | 64.0 | 68.51 |
| CDY60132 | Canola | cytosol | 63.29 | 67.76 |
| GSMUA_Achr9P17590_001 | Banana | cytosol | 76.47 | 64.87 |
| HORVU4Hr1G085830.4 | Barley | cytosol | 33.41 | 41.64 |
| HORVU6Hr1G013680.2 | Barley | cytosol, plastid | 32.0 | 36.76 |
| HORVU5Hr1G046190.1 | Barley | plastid | 29.88 | 34.05 |
| HORVU7Hr1G051180.3 | Barley | cytosol | 26.35 | 33.53 |
| HORVU4Hr1G023490.7 | Barley | endoplasmic reticulum, vacuole | 28.0 | 31.4 |
| HORVU1Hr1G051380.3 | Barley | cytosol | 33.18 | 30.0 |
| HORVU5Hr1G120960.2 | Barley | cytosol | 27.06 | 26.08 |
| HORVU0Hr1G016660.4 | Barley | cytosol | 27.76 | 25.6 |
| HORVU6Hr1G068270.1 | Barley | cytosol | 27.76 | 25.6 |
| HORVU7Hr1G008690.3 | Barley | endoplasmic reticulum, plasma membrane | 28.24 | 24.0 |
| HORVU6Hr1G054600.5 | Barley | nucleus | 30.59 | 19.15 |
| HORVU2Hr1G084400.1 | Barley | nucleus | 31.29 | 17.66 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:13.1.1.2.4 | MapMan:14.6.3.1.3 | MapMan:15.3.5.6.2.2 | MapMan:18.4.3.1.4 | Gene3D:3.30.200.20 |
| EMBL:AK355137 | EMBL:AK363778 | EMBL:AK363865 | UniProt:F2CU35 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
| GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
| GO:GO:0019538 | EnsemblPlantsGene:HORVU1Hr1G062980 | EnsemblPlants:HORVU1Hr1G062980.2 | InterPro:IPR000719 | InterPro:Kinase-like_dom_sf | PFAM:PF00069 |
| PIRSF:PIRSF000654 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR24056 | PANTHER:PTHR24056:SF242 |
| InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI0002004DCC |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CU35]
Coordinates
chrchr1H:-:452492329..452500046
Molecular Weight (calculated)
47594.5 Da
IEP (calculated)
9.535
GRAVY (calculated)
-0.357
Length
425 amino acids
Sequence
(BLAST)
(BLAST)
001: MATGGGGDDA GEKRVTDRYL KREVLGEGTY GVVFKAIDTK TGETVAIKRI RLGKYKEGVN FTALREIKLL KELKDPNIIE LIDAFPYKGN LHLVFEFMET
101: DLEAVIRDRN IVLSPADIKS YIQMMLKGLA FCHKKWVLHR DMKPNNLLIG AEGQLKLGDF GLARIFGSPE RNFTHQVFAR WYRAPELLFG TKQYGSAVDV
201: WAAGCIFAEL LLRRPFLQGS SDIDQLGKIF AAFGTPKSSQ WPDMVCLPDY VEYQFVSAPP LRSLFPMASD DALDLLSRMF TYDPKARITA QQALEHRYFS
301: SVPAPTKPNL LPRPKLKGDP GNDKIPDLNL HGAPVVVSPP RKLRRVSAPD GIESNAYRAE KAEEHPTTGM RRSEGMSSQS SRIPMSVDVG VVFGTRPAPR
401: PTLNSADKSR LKRKLDMDPE FEYAE
101: DLEAVIRDRN IVLSPADIKS YIQMMLKGLA FCHKKWVLHR DMKPNNLLIG AEGQLKLGDF GLARIFGSPE RNFTHQVFAR WYRAPELLFG TKQYGSAVDV
201: WAAGCIFAEL LLRRPFLQGS SDIDQLGKIF AAFGTPKSSQ WPDMVCLPDY VEYQFVSAPP LRSLFPMASD DALDLLSRMF TYDPKARITA QQALEHRYFS
301: SVPAPTKPNL LPRPKLKGDP GNDKIPDLNL HGAPVVVSPP RKLRRVSAPD GIESNAYRAE KAEEHPTTGM RRSEGMSSQS SRIPMSVDVG VVFGTRPAPR
401: PTLNSADKSR LKRKLDMDPE FEYAE
001: MEQPKKVADR YLKREVLGQG TYGVVFKATD TKNGETVAIK KIRLGKEKEG VNVTALREIK LLKELKHPHI IELIDAFPHK ENLHIVFEFM ETDLEAVIRD
101: RNLYLSPGDV KSYLQMILKG LEYCHGKWVL HRDMKPNNLL IGPNGQLKLA DFGLARIFGS PGRKFTHQVF ARWYRAPELL FGAKQYDGAV DVWAAGCIFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMICLP DYVEYQFVPA PSLRSLLPTV SEDALDLLSK MFTYDPKSRI SIQQALKHRY FTSAPSPTDP
301: LKLPRPVSKQ DAKSSDSKLE AIKVLSPAHK FRRVMPDRGK SGNGFKDQSV DVMRQASHDG QAPMSLDFTI LAERPPNRPT ITSADRSHLK RKLDLEFL
101: RNLYLSPGDV KSYLQMILKG LEYCHGKWVL HRDMKPNNLL IGPNGQLKLA DFGLARIFGS PGRKFTHQVF ARWYRAPELL FGAKQYDGAV DVWAAGCIFA
201: ELLLRRPFLQ GNSDIDQLSK IFAAFGTPKA DQWPDMICLP DYVEYQFVPA PSLRSLLPTV SEDALDLLSK MFTYDPKSRI SIQQALKHRY FTSAPSPTDP
301: LKLPRPVSKQ DAKSSDSKLE AIKVLSPAHK FRRVMPDRGK SGNGFKDQSV DVMRQASHDG QAPMSLDFTI LAERPPNRPT ITSADRSHLK RKLDLEFL
Arabidopsis Description
CDKD-1Cyclin-dependent kinase D-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.