Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
HORVU4Hr1G035250.1 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT4G36490.1 | HORVU4Hr1G035250.1 | AT4G26630.1 | 25387881 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6A01G097200.1 | Wheat | plastid | 90.92 | 93.15 |
TraesCS6B01G125700.1 | Wheat | plastid | 90.45 | 92.36 |
TraesCS6D01G085200.1 | Wheat | plastid | 90.13 | 92.03 |
Os02t0133200-01 | Rice | plasma membrane | 79.14 | 78.64 |
OQU84321 | Sorghum | cytosol | 70.38 | 78.37 |
Zm00001d015175_P002 | Maize | plastid | 73.73 | 71.78 |
KRH76738 | Soybean | plastid | 45.38 | 59.25 |
KRH28724 | Soybean | plastid | 44.59 | 57.97 |
GSMUA_Achr6P03210_001 | Banana | cytosol | 54.78 | 57.91 |
KRH69861 | Soybean | plastid | 49.68 | 56.22 |
HORVU2Hr1G082530.1 | Barley | cytosol | 51.43 | 55.79 |
KRH08168 | Soybean | plastid | 49.2 | 55.68 |
GSMUA_Achr5P23630_001 | Banana | cytosol | 53.34 | 55.65 |
AT4G36490.1 | Thale cress | plastid | 47.77 | 55.25 |
KRH24439 | Soybean | plastid | 28.5 | 54.57 |
HORVU1Hr1G088100.1 | Barley | cytosol | 13.85 | 54.04 |
CDX75444 | Canola | cytosol | 45.22 | 53.18 |
AT2G18180.1 | Thale cress | plastid | 47.13 | 53.05 |
CDX69071 | Canola | cytosol | 45.06 | 53.0 |
CDX89709 | Canola | cytosol, mitochondrion | 38.06 | 52.53 |
CDY15887 | Canola | cytosol | 45.54 | 52.09 |
CDX99586 | Canola | cytosol | 45.54 | 52.0 |
PGSC0003DMT400043532 | Potato | cytosol | 45.86 | 51.71 |
AT2G21540.2 | Thale cress | cytosol, nucleus, vacuole | 45.06 | 51.64 |
Bra011544.1-P | Field mustard | cytosol, plastid | 40.61 | 51.52 |
Bra034638.1-P | Field mustard | cytosol | 44.59 | 51.47 |
GSMUA_Achr2P14280_001 | Banana | cytosol, nucleus, plastid | 53.98 | 51.36 |
Solyc11g040280.1.1 | Tomato | cytosol | 48.89 | 51.34 |
KRH51503 | Soybean | cytosol | 46.82 | 51.31 |
CDY45318 | Canola | cytosol, plastid | 40.76 | 51.2 |
KRH29420 | Soybean | cytosol, nucleus, plastid | 45.86 | 51.15 |
Solyc10g053900.1.1 | Tomato | cytosol, plastid | 46.34 | 51.14 |
KRH60806 | Soybean | cytosol | 46.5 | 51.05 |
PGSC0003DMT400001903 | Potato | cytosol, nucleus, plastid | 46.66 | 51.05 |
AT4G34580.2 | Thale cress | cytosol | 44.9 | 50.9 |
Solyc01g109860.2.1 | Tomato | cytosol, nucleus, plastid | 46.5 | 50.87 |
VIT_04s0023g02400.t01 | Wine grape | cytosol, nucleus, plastid | 43.31 | 50.75 |
Bra030294.1-P | Field mustard | cytosol, nucleus, plastid | 39.01 | 50.2 |
PGSC0003DMT400021690 | Potato | nucleus | 48.09 | 50.0 |
CDY12126 | Canola | cytosol | 42.52 | 49.91 |
Bra017663.1-P | Field mustard | cytosol, plastid | 36.15 | 49.78 |
AT2G16380.1 | Thale cress | cytosol | 43.31 | 49.73 |
CDX90317 | Canola | cytosol | 42.36 | 49.53 |
CDY17469 | Canola | cytosol | 44.9 | 49.39 |
VIT_03s0038g04480.t01 | Wine grape | cytosol | 48.73 | 49.35 |
Bra010699.1-P | Field mustard | cytosol | 42.2 | 49.35 |
AT4G39180.1 | Thale cress | cytosol | 43.31 | 49.1 |
CDX76291 | Canola | cytosol | 44.9 | 47.64 |
CDX69225 | Canola | mitochondrion | 44.27 | 45.8 |
HORVU7Hr1G037200.1 | Barley | nucleus | 15.29 | 44.86 |
HORVU3Hr1G112740.3 | Barley | nucleus | 15.61 | 43.75 |
HORVU7Hr1G040650.2 | Barley | cytosol, nucleus, plastid | 15.45 | 43.3 |
HORVU2Hr1G111160.14 | Barley | mitochondrion | 24.52 | 39.09 |
HORVU6Hr1G071770.19 | Barley | cytosol | 37.26 | 37.86 |
HORVU3Hr1G065830.17 | Barley | cytosol, mitochondrion, plastid | 39.81 | 37.37 |
HORVU6Hr1G017570.5 | Barley | cytosol, nucleus, plastid | 44.27 | 37.32 |
HORVU1Hr1G091860.1 | Barley | cytosol | 9.55 | 36.81 |
HORVU7Hr1G048880.11 | Barley | mitochondrion | 36.94 | 35.86 |
HORVU1Hr1G078880.9 | Barley | cytosol, nucleus | 41.4 | 35.67 |
HORVU5Hr1G052230.2 | Barley | cytosol | 12.42 | 23.21 |
HORVU7Hr1G090330.11 | Barley | cytosol, nucleus, plastid | 11.78 | 21.76 |
HORVU6Hr1G032510.1 | Barley | cytosol, nucleus, peroxisome | 11.78 | 21.51 |
CDY02262 | Canola | cytosol, plastid | 42.83 | 18.67 |
Bra013077.1-P | Field mustard | cytosol, plastid | 42.83 | 18.44 |
Protein Annotations
Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.1 | UniProt:A0A287TG22 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil | EnsemblPlantsGene:HORVU6Hr1G017580 | EnsemblPlants:HORVU6Hr1G017580.5 | InterPro:IPR001251 |
InterPro:IPR036865 | PFAM:PF00650 | PFAM:PF03765 | PRINTS:PR00180 | PFscan:PS50191 | PANTHER:PTHR23324 |
PANTHER:PTHR23324:SF55 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI000B480338 |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:41712459..41716457
Molecular Weight (calculated)
68950.8 Da
IEP (calculated)
8.265
GRAVY (calculated)
-0.411
Length
628 amino acids
Sequence
(BLAST)
(BLAST)
001: MSATPGSATA AAADGAASTP TSRAPSMASS ASLRHRAMSA SSKMLRNSLS RRSGRQRSSK VMSVAIEDVR DAKEAASVDA FRQTLVLEEL LPARHDDYHM
101: MLRFLKARKF EIDKSKQMWS DMLQWRKEFG TDTIMDDFIF EEVEQVLEHY PQGHHGVDKD GRPIYIEKLG AIDTTKLLQV TSMDRYVRYH VREFERAFAL
201: KFPACSISAK RHVDQSTTIL DVSGVGYKNF NKAARDLIGQ LQKIDGDNFP ETLCRMFIIN AGQGFRLLWN TVKSFLDPKT TAKIHVLGNK YQSKLLEVID
301: PSELPEFLGG TCVCEGGGCM RSDKGPWKDP EIIKMVQCGL GRCGLNSSDP ASAEEKIVTE DEAAPATKKQ ESMRAADSPK VVRDKIEHPP QMSPLHEVAN
401: EETKAAPLDG QGGSSAPYDD LFPMVDKGME FNWNGEMSAE KLALARDMYA SLPDAYKHGD AGDRQVVTGF MAFVMGVVAM FRVGKIAPKR AMDAAMGIAT
501: MEAMAKNRKL LQAQGQGGGG GGPVVVAGVS TAQYEALAKR VGELEEKMAA LGSRPPEMPA DKAEQLAAAA TRLDTLEAEL EATKKLLETS KGQQEEVLAY
601: IEKKKKKKGM VRPTFSFARA YHSTRLIS
101: MLRFLKARKF EIDKSKQMWS DMLQWRKEFG TDTIMDDFIF EEVEQVLEHY PQGHHGVDKD GRPIYIEKLG AIDTTKLLQV TSMDRYVRYH VREFERAFAL
201: KFPACSISAK RHVDQSTTIL DVSGVGYKNF NKAARDLIGQ LQKIDGDNFP ETLCRMFIIN AGQGFRLLWN TVKSFLDPKT TAKIHVLGNK YQSKLLEVID
301: PSELPEFLGG TCVCEGGGCM RSDKGPWKDP EIIKMVQCGL GRCGLNSSDP ASAEEKIVTE DEAAPATKKQ ESMRAADSPK VVRDKIEHPP QMSPLHEVAN
401: EETKAAPLDG QGGSSAPYDD LFPMVDKGME FNWNGEMSAE KLALARDMYA SLPDAYKHGD AGDRQVVTGF MAFVMGVVAM FRVGKIAPKR AMDAAMGIAT
501: MEAMAKNRKL LQAQGQGGGG GGPVVVAGVS TAQYEALAKR VGELEEKMAA LGSRPPEMPA DKAEQLAAAA TRLDTLEAEL EATKKLLETS KGQQEEVLAY
601: IEKKKKKKGM VRPTFSFARA YHSTRLIS
001: MSLNVDLDVC VLERPNVCSF KKRSCSKLSC SLTKKRRSSK VMSVEIFEDE HDAEELKVVD AFRQVLILDE LLPDKHDDYH MMLRFLKARK FDLEKTNQMW
101: SDMLRWRKEF GADTVMEDFE FKEIDEVLKY YPQGHHGVDK EGRPVYIERL GQVDSTKLMQ VTTMDRYVNY HVMEFERTFN VKFPACSIAA KKHIDQSTTI
201: LDVQGVGLKN FNKAARDLIT RLQKVDGDNY PETLNRMFII NAGSGFRMLW NTVKSFLDPK TTAKIHVLGN KYQSKLLEII DASELPEFLG GSCTCADNGG
301: CMRSDKGPWN NPDIMKRVNN GDHICSKRSQ ADNAGENIIS QGNNSAVEEA PETDQSQPSP CQNVVVAHPA WNIPEAHKFS LSKRDVYAIQ EACKATNESG
401: RSPIFTGVMA FVMGVVTMIR VTKNVPRKLT ESTIYSSPVY CDENSMNKSS MHGKKMATTT ISGEDFMAVM KRMAELEQKV TNLSAQPATM PPEKEEMLNA
501: AISRADFLEQ ELAATKKALD DSLTRQEDLV AYVERKKKKK KLVRFQINAY LTNFCFGV
101: SDMLRWRKEF GADTVMEDFE FKEIDEVLKY YPQGHHGVDK EGRPVYIERL GQVDSTKLMQ VTTMDRYVNY HVMEFERTFN VKFPACSIAA KKHIDQSTTI
201: LDVQGVGLKN FNKAARDLIT RLQKVDGDNY PETLNRMFII NAGSGFRMLW NTVKSFLDPK TTAKIHVLGN KYQSKLLEII DASELPEFLG GSCTCADNGG
301: CMRSDKGPWN NPDIMKRVNN GDHICSKRSQ ADNAGENIIS QGNNSAVEEA PETDQSQPSP CQNVVVAHPA WNIPEAHKFS LSKRDVYAIQ EACKATNESG
401: RSPIFTGVMA FVMGVVTMIR VTKNVPRKLT ESTIYSSPVY CDENSMNKSS MHGKKMATTT ISGEDFMAVM KRMAELEQKV TNLSAQPATM PPEKEEMLNA
501: AISRADFLEQ ELAATKKALD DSLTRQEDLV AYVERKKKKK KLVRFQINAY LTNFCFGV
Arabidopsis Description
SFH10Phosphatidylinositol/phosphatidylcholine transfer protein SFH10 [Source:UniProtKB/Swiss-Prot;Acc:Q9SI13]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.