Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030294.1-P | Field mustard | cytosol, nucleus, plastid | 88.52 | 99.59 |
| CDX99586 | Canola | cytosol | 99.09 | 98.91 |
| AT2G21540.2 | Thale cress | cytosol, nucleus, vacuole | 87.8 | 87.96 |
| CDY12126 | Canola | cytosol | 71.4 | 73.27 |
| CDX90317 | Canola | cytosol | 70.49 | 72.07 |
| CDY15888 | Canola | cytosol | 32.97 | 63.96 |
| KRH24439 | Soybean | plastid | 37.89 | 63.41 |
| CDX69071 | Canola | cytosol | 61.38 | 63.11 |
| CDX75444 | Canola | cytosol | 61.2 | 62.92 |
| CDX99587 | Canola | cytosol, mitochondrion | 32.42 | 62.9 |
| KRH51503 | Soybean | cytosol | 65.21 | 62.48 |
| KRH60806 | Soybean | cytosol | 64.12 | 61.54 |
| KRH29420 | Soybean | cytosol, nucleus, plastid | 62.48 | 60.92 |
| CDY45318 | Canola | cytosol, plastid | 54.83 | 60.2 |
| PGSC0003DMT400043532 | Potato | cytosol | 60.47 | 59.6 |
| CDY17469 | Canola | cytosol | 61.57 | 59.19 |
| CDX89709 | Canola | cytosol, mitochondrion | 49.0 | 59.12 |
| Solyc10g053900.1.1 | Tomato | cytosol, plastid | 60.29 | 58.17 |
| PGSC0003DMT400001903 | Potato | cytosol, nucleus, plastid | 60.66 | 58.01 |
| Solyc01g109860.2.1 | Tomato | cytosol, nucleus, plastid | 60.11 | 57.49 |
| CDX76291 | Canola | cytosol | 61.75 | 57.26 |
| PGSC0003DMT400021690 | Potato | nucleus | 60.84 | 55.3 |
| Solyc11g040280.1.1 | Tomato | cytosol | 60.11 | 55.18 |
| GSMUA_Achr6P03210_001 | Banana | cytosol | 57.92 | 53.54 |
| GSMUA_Achr5P23630_001 | Banana | cytosol | 58.65 | 53.49 |
| TraesCS2D01G335700.2 | Wheat | nucleus | 56.47 | 52.45 |
| HORVU2Hr1G082530.1 | Barley | cytosol | 55.19 | 52.33 |
| TraesCS2A01G327200.2 | Wheat | nucleus | 56.1 | 52.12 |
| TraesCS2B01G354800.2 | Wheat | nucleus | 55.74 | 51.78 |
| Os10t0122600-01 | Rice | cytosol, nucleus, plastid | 56.1 | 51.51 |
| Os02t0440900-00 | Rice | cytosol | 55.92 | 51.34 |
| Zm00001d016601_P006 | Maize | cytosol | 55.56 | 50.41 |
| OQU85018 | Sorghum | nucleus | 56.28 | 50.41 |
| CDY11954 | Canola | cytosol | 17.85 | 50.26 |
| OQU84321 | Sorghum | cytosol | 50.64 | 49.29 |
| CDX90316 | Canola | cytosol | 55.37 | 49.19 |
| CDY12125 | Canola | cytosol | 55.01 | 49.03 |
| GSMUA_Achr2P14280_001 | Banana | cytosol, nucleus, plastid | 58.47 | 48.64 |
| CDX69225 | Canola | mitochondrion | 53.73 | 48.6 |
| CDX82040 | Canola | cytosol | 53.19 | 48.42 |
| CDY13810 | Canola | cytosol | 54.1 | 46.99 |
| TraesCS6A01G097200.1 | Wheat | plastid | 52.28 | 46.82 |
| TraesCS6B01G125700.1 | Wheat | plastid | 52.28 | 46.67 |
| TraesCS6D01G085200.1 | Wheat | plastid | 52.09 | 46.5 |
| HORVU6Hr1G017580.5 | Barley | plastid | 52.09 | 45.54 |
| Os02t0133200-01 | Rice | plasma membrane | 51.91 | 45.09 |
| CDY39363 | Canola | cytosol | 48.27 | 44.76 |
| CDX68133 | Canola | cytosol | 49.54 | 44.74 |
| CDX85889 | Canola | cytosol | 49.18 | 44.48 |
| CDY11957 | Canola | cytosol | 35.7 | 44.04 |
| Zm00001d015175_P002 | Maize | plastid | 51.73 | 44.03 |
| CDY29415 | Canola | nucleus | 48.45 | 43.25 |
| CDY17730 | Canola | cytosol | 28.96 | 39.55 |
| CDX77773 | Canola | cytosol | 28.78 | 38.82 |
| CDY52084 | Canola | cytosol | 39.89 | 37.31 |
| CDY51966 | Canola | cytosol | 39.16 | 36.13 |
| CDX77382 | Canola | cytosol | 40.26 | 35.7 |
| CDY17397 | Canola | cytosol | 38.62 | 35.63 |
| CDY50018 | Canola | vacuole | 41.17 | 35.37 |
| CDY42378 | Canola | nucleus | 41.17 | 35.15 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 40.98 | 34.99 |
| CDY36780 | Canola | plastid | 36.07 | 34.74 |
| CDY51073 | Canola | mitochondrion, nucleus | 30.78 | 33.07 |
| CDY40544 | Canola | cytosol | 15.48 | 25.76 |
| CDY53762 | Canola | cytosol | 15.12 | 25.38 |
| CDY52903 | Canola | cytosol | 15.12 | 25.38 |
| CDY28908 | Canola | cytosol | 15.3 | 25.38 |
| CDY41066 | Canola | cytosol | 14.94 | 24.62 |
| CDX77792 | Canola | cytosol | 14.94 | 24.55 |
| CDY25949 | Canola | cytosol | 14.75 | 24.32 |
| CDY42389 | Canola | cytosol | 14.21 | 24.0 |
| CDY17710 | Canola | cytosol | 14.57 | 23.95 |
| CDY10527 | Canola | cytosol | 14.03 | 23.69 |
| CDY02262 | Canola | cytosol, plastid | 56.83 | 21.65 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.8.20 | Gene3D:3.40.525.10 | MapMan:35.1 | GO:A0A078FSP9 | UniProt:A0A078FSP9 | EnsemblPlants:CDY15887 |
| ProteinID:CDY15887 | ProteinID:CDY15887.1 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf |
| ncoils:Coil | EnsemblPlantsGene:GSBRNA2T00090247001 | InterPro:IPR001251 | InterPro:IPR036865 | PFAM:PF00650 | PFAM:PF03765 |
| PRINTS:PR00180 | PFscan:PS50191 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF144 | SMART:SM00516 | SMART:SM01100 |
| SUPFAM:SSF46938 | SUPFAM:SSF52087 | UniParc:UPI0004EE45B7 | SEG:seg | : | : |
Description
BnaA04g12240DBnaA04g12240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSP9]
Coordinates
chrLK032059:+:302369..305927
Molecular Weight (calculated)
62781.3 Da
IEP (calculated)
8.093
GRAVY (calculated)
-0.576
Length
549 amino acids
Sequence
(BLAST)
(BLAST)
001: MADTMSAHMD RHSKPDHECS EDDKKTKLCS FKKKAINASN KFKHSFTKKT RRNSRVMSVS IVDDIDVEEL QAVDAFRQAL ILDELLPSRH DDHHMMLRFL
101: RARKFDIEKA KQMWCDMINW RKEFGTDAIM EDFDFKEIDE VIKYYPQGYH GVDKEGRPIY IERLGQVDAT KLMQVTTIDR YVNYHVREFE KAFNIKLPAC
201: SIAAKRHIDQ STTILDVQGV GLKNFSKAAR DLLQRIQKID SDNYPESLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVYESTTE KCETFEKNTF NAENEKFTPI VDKTVDASST WPTTLHKATF
401: TEPEDLYSAV KPSERKGGEG YLFGGVMSLV MGLMTVVRLT KNMPRKLTEA AIYGGAAEKG ETAMVSTQEY MSMVKRMAEL EEKCRSLDNQ PAPFSAEKEQ
501: ILNAALTRVD QLEFQLSETK KTLDEAMAKQ LEIVAYIEKK KKKKKFFGF
101: RARKFDIEKA KQMWCDMINW RKEFGTDAIM EDFDFKEIDE VIKYYPQGYH GVDKEGRPIY IERLGQVDAT KLMQVTTIDR YVNYHVREFE KAFNIKLPAC
201: SIAAKRHIDQ STTILDVQGV GLKNFSKAAR DLLQRIQKID SDNYPESLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVYESTTE KCETFEKNTF NAENEKFTPI VDKTVDASST WPTTLHKATF
401: TEPEDLYSAV KPSERKGGEG YLFGGVMSLV MGLMTVVRLT KNMPRKLTEA AIYGGAAEKG ETAMVSTQEY MSMVKRMAEL EEKCRSLDNQ PAPFSAEKEQ
501: ILNAALTRVD QLEFQLSETK KTLDEAMAKQ LEIVAYIEKK KKKKKFFGF
001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP
401: EPEDLYSAVK PSQRRGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE EKCRSLDNQP AAFSPEKEQI
501: LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK KKKKFFGF
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KSDSFAKNKF DAENTKFIPM IDKTVNASTW PTNLHKSNYP
401: EPEDLYSAVK PSQRRGGEGY LFGGVMSLVM GLMTVVRLTK NMPRKLTEAA IYGGEVDKAE TTMVSNQEYM SMVKRMAELE EKCRSLDNQP AAFSPEKEQI
501: LTAALSRVDE LELQLAQTKK TLEETMATQH VIMAYIDKKK KKKKFFGF
Arabidopsis Description
SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.