CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42378	Canola	nucleus	97.51	97.51
AT1G55690.4	Thale cress	nucleus	81.03	83.36
CDY50018	Canola	vacuole	79.94	80.44
CDY51073	Canola	mitochondrion, nucleus	60.5	76.13
Zm00001d039981_P001	Maize	cytosol	14.0	73.17
Zm00001d031251_P001	Maize	cytosol, mitochondrion	13.84	68.99
HORVU1Hr1G088100.1	Barley	cytosol	16.64	66.46
VIT_19s0015g01160.t01	Wine grape	cytosol	62.99	65.22
KRH62508	Soybean	cytosol	60.03	62.26
HORVU7Hr1G037200.1	Barley	nucleus	20.68	62.15
Zm00001d012531_P001	Maize	mitochondrion	12.6	61.83
KRH45371	Soybean	cytosol	42.3	61.82
KRH56402	Soybean	cytosol	59.41	61.61
Solyc07g066090.2.1	Tomato	nucleus	58.16	60.32
HORVU3Hr1G112740.3	Barley	nucleus	21.0	60.27
HORVU7Hr1G040650.2	Barley	cytosol, nucleus, plastid	20.84	59.82
PGSC0003DMT400057292	Potato	nucleus	57.23	59.55
KRH07662	Soybean	cytosol	55.99	58.16
Solyc10g005740.1.1	Tomato	nucleus	55.37	57.61
CDY11957	Canola	cytosol	39.35	56.85
Zm00001d043774_P001	Maize	cytosol	7.47	56.47
GSMUA_Achr4P09770_001	Banana	cytosol	39.5	55.7
CDX99587	Canola	cytosol, mitochondrion	23.95	54.42
CDY11954	Canola	cytosol	16.33	53.85
PGSC0003DMT400022405	Potato	cytosol, nucleus	48.37	53.44
CDY15888	Canola	cytosol	23.48	53.36
GSMUA_Achr7P06190_001	Banana	cytosol	46.19	51.47
GSMUA_Achr3P04130_001	Banana	nucleus	49.77	51.36
CDY17397	Canola	cytosol	46.66	50.42
CDY51966	Canola	cytosol	46.5	50.25
GSMUA_Achr3P11960_001	Banana	cytosol, plastid	47.12	49.67
GSMUA_Achr5P04200_001	Banana	plastid	48.06	49.44
Os02t0721800-01	Rice	cytosol	46.81	49.18
Os08t0341700-01	Rice	nucleus	48.37	48.82
TraesCS7D01G238000.2	Wheat	cytosol	45.88	48.76
OQU80990	Sorghum	cytosol	45.88	48.6
KXG40069	Sorghum	nucleus	47.59	48.57
HORVU6Hr1G071770.19	Barley	cytosol	46.66	48.54
TraesCS6D01G265200.1	Wheat	cytosol	46.66	48.47
Zm00001d014589_P001	Maize	cytosol	7.31	48.45
TraesCS6B01G313500.1	Wheat	cytosol	46.5	48.3
Zm00001d017876_P018	Maize	cytosol	46.35	48.3
CDY36780	Canola	plastid	42.77	48.25
TraesCS6A01G284800.1	Wheat	cytosol	46.5	48.23
Zm00001d051674_P037	Maize	cytosol	45.88	48.2
TraesCS2D01G506400.1	Wheat	nucleus	47.43	48.18
TraesCS2B01G533900.1	Wheat	nucleus	47.12	48.1
KXG30865	Sorghum	cytosol	46.03	47.97
Zm00001d045670_P001	Maize	cytosol	14.0	47.87
Os08t0497300-01	Rice	cytosol, plastid	44.79	47.68
Zm00001d005995_P003	Maize	nucleus	44.01	47.25
EER96946	Sorghum	cytosol, nucleus, plastid	43.55	46.74
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	47.9	46.67
Os09t0481100-01	Rice	nucleus	44.17	46.48
HORVU7Hr1G048880.11	Barley	mitochondrion	45.88	45.6
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	21.0	45.45
TraesCS7B01G135600.2	Wheat	plastid	46.19	44.53
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	46.35	44.41
Zm00001d031316_P020	Maize	cytosol	44.48	44.34
CDY12126	Canola	cytosol	36.55	43.93
Zm00001d045718_P001	Maize	cytosol	17.11	43.48
CDX90317	Canola	cytosol	36.24	43.39
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	13.06	42.42
Zm00001d050131_P002	Maize	cytosol	42.15	42.41
CDY12125	Canola	cytosol	40.59	42.37
HORVU1Hr1G091860.1	Barley	cytosol	10.73	42.33
CDX82040	Canola	cytosol	39.66	42.29
CDX90316	Canola	cytosol	40.44	42.07
CDY52084	Canola	cytosol	38.26	41.91
CDY15887	Canola	cytosol	34.99	40.98
CDX68133	Canola	cytosol	38.72	40.95
CDX99586	Canola	cytosol	34.99	40.91
CDX85889	Canola	cytosol	38.57	40.86
CDY13810	Canola	cytosol	39.97	40.66
CDX75444	Canola	cytosol	33.44	40.26
CDY39363	Canola	cytosol	37.01	40.2
Zm00001d052840_P016	Maize	plastid	45.26	40.14
CDX69071	Canola	cytosol	33.28	40.07
CDX77382	Canola	cytosol	38.26	39.74
CDY45318	Canola	cytosol, plastid	30.64	39.4
CDX89709	Canola	cytosol, mitochondrion	27.84	39.34
CDY29415	Canola	nucleus	37.48	39.19
Zm00001d037983_P001	Maize	cytosol	13.84	37.71
CDY17469	Canola	cytosol	33.44	37.65
CDY17730	Canola	cytosol	23.33	37.31
CDX77773	Canola	cytosol	23.17	36.61
CDX76291	Canola	cytosol	33.44	36.32
Zm00001d010393_P001	Maize	plastid	20.37	35.99
CDX69225	Canola	mitochondrion	30.64	32.45
Zm00001d047488_P001	Maize	nucleus	7.0	28.12
CDY52903	Canola	cytosol	13.69	26.91
CDY53762	Canola	cytosol	13.69	26.91
CDY28908	Canola	cytosol	13.69	26.59
CDY40544	Canola	cytosol	13.53	26.36
CDY10527	Canola	cytosol	13.22	26.15
CDY42389	Canola	cytosol	13.22	26.15
CDY25949	Canola	cytosol	13.53	26.13
CDY41066	Canola	cytosol	13.53	26.13
CDX77792	Canola	cytosol	13.22	25.45
CDY17710	Canola	cytosol	13.06	25.15
Zm00001d035370_P003	Maize	plastid	12.13	19.12
Zm00001d005778_P001	Maize	plastid	6.53	14.95
CDY02262	Canola	cytosol, plastid	32.66	14.57
CDY36781	Canola	extracellular	0.16	0.6

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A078F7Y1	EnsemblPlants:CDY10540	ProteinID:CDY10540
ProteinID:CDY10540.1	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlantsGene:GSBRNA2T00032497001
InterPro:IPR001251	InterPro:IPR036865	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF84	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0004EDD80F
SEG:seg	:	:	:	:	:

Description

BnaC03g70740DBnaC03g70740D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7Y1]

Coordinates

chrLK032004:+:235195..239444

Molecular Weight (calculated)

74131.2 Da

IEP (calculated)

8.562

GRAVY (calculated)

-0.530

Length

643 amino acids

Sequence
(BLAST)

001: MLMSSLSALQ SFPFDRDMSG VEENGALDEI RERRSDFEIS EEDERRRSKI GSLKKKAIHA STKFTHSLKK RGKKKIDYRF PPVVSIEDVR DEKEESVVLE
101: FRRNLLERHL LPPRHDEYHT LLRFLKARDF NIEKTIQMWD EMLRWRKEYG TDTILEDFEF QELEEVLQYY PQGYHGVDKE GRPVYIERLG KAHPSKLMRI
201: TTIDRYLKYH VQEFERALLE KFPACSIAAK RRICSTTTIL DVQGLGMKNF SQTAVNLVAA MSKIDNSYYP ETLHRMFIVN AGTGFKKMLW PAAQKFLDAK
301: TIAKIHVLDS RSLSKLHEVI DSSQLPDFLG GSCSCFGEGG CLRSNKGPWN DPEIMKLLYH GESSLFRQIS RKLSDPQNSS SSYISIHPSK AMQAESSAAE
401: SESCSDVPAS LTGRMCSASA HVNPVYEDAR ASDVNGYYSC DDKFDIPNIA TNRKGQERQS HYQMIELNQA ALGLKRETSP PGTSIIIRWL HDLRGTMDII
501: RTENVAKRIL ALLLKLAAVF RCIPFQILRR KNTITPSIPT EDENSSRLIS APTETTMKDK IRPCLERIQE LEKVYEEMRN KPVEIPVEKE RMLMDSLDRI
601: KSVEFDLVKT KRVLHATVVK QMEITEMLES LRDSQLHRRR LFC

Best Arabidopsis Sequence Match ( AT1G55690.5 )
(BLAST)

001: MSGVEEISTL DEFRERRSDF EISEDERRRS KIGNLKKKAI NASTKFTHSL KKRGKRKIDY RVPAVSIEDV RDEKEESVVL EFRRKLLERD LLPPRHDEYH
101: TLLRFLKARD LNIEKTTQLW EEMLRWRKEY GTDTILEDFD FEELEEVLQY YPQGYHGVDK EGRPVYIERL GKAHPSKLMR ITTIDRYLKY HVQEFERALQ
201: EKFPACSIAA KRRICSTTTI LDVQGLGIKN FTPTAANLVA AMSKIDNSYY PETLHRMYIV NAGTGFKKML WPAAQKFLDA KTIAKIHVLE PKSLFKLHEV
301: IDSSQLPEFL GGSCSCFGDG GGCLRSNKGP WNDPEIMKLI YHGESSLFRQ STRKLTDPHY SSSYISIHPS KAIQAETSAA ESISCSDVPS SPTGRLCSAS
401: SHVNSAYEEA RASDVNGYYS CDDKFAIPDK ATNRKGQERQ SQYQMRELNA TTIGLKCETS SPGAPIIRWL HDLRVMIDKI KCENLAKRLL SLMLKLAAVF
501: RYTPLELLRS QTTVSPSSLT EDDSRCSLIS PPPREPTMKD RILPCLERIQ KLEKSYEDIR NKPVAIPVEK ERMLMDSLDR IKSVEFDLDK TKRLLHATVM
601: KQMEITEMLQ NIRDSQLHRR RRLFC

Arabidopsis Description

SFH13Phosphatidylinositol/phosphatidylcholine transfer protein SFH13 [Source:UniProtKB/Swiss-Prot;Acc:Q501H5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.