CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039981_P001	Maize	cytosol	19.44	95.94
Zm00001d045718_P001	Maize	cytosol	36.41	87.35
Zm00001d031316_P020	Maize	cytosol	89.79	84.5
Zm00001d014589_P001	Maize	cytosol	13.34	83.51
TraesCS7D01G238000.2	Wheat	cytosol	81.71	81.98
Os08t0497300-01	Rice	cytosol, plastid	79.41	79.8
Zm00001d052840_P016	Maize	plastid	89.46	74.9
HORVU7Hr1G048880.11	Barley	mitochondrion	79.57	74.65
TraesCS7B01G135600.2	Wheat	plastid	81.38	74.06
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	81.71	73.92
EER96946	Sorghum	cytosol, nucleus, plastid	70.68	71.62
Zm00001d010393_P001	Maize	plastid	42.83	71.43
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	21.75	66.67
Zm00001d045670_P001	Maize	cytosol	20.59	66.49
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	29.0	59.26
GSMUA_Achr4P09770_001	Banana	cytosol	43.49	57.89
KXG30865	Sorghum	cytosol	55.52	54.62
KXG40069	Sorghum	nucleus	55.35	53.33
GSMUA_Achr3P04130_001	Banana	nucleus	54.37	52.97
GSMUA_Achr5P04200_001	Banana	plastid	52.55	51.04
KRH45371	Soybean	cytosol	36.24	50.0
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	54.2	49.85
VIT_19s0015g01160.t01	Wine grape	cytosol	49.42	48.31
Zm00001d037983_P001	Maize	cytosol	18.62	47.88
KRH62508	Soybean	cytosol	48.43	47.42
KRH56402	Soybean	cytosol	48.27	47.26
Zm00001d047488_P001	Maize	nucleus	12.36	46.88
KRH07662	Soybean	cytosol	47.28	46.37
Solyc07g066090.2.1	Tomato	nucleus	47.12	46.13
CDY10540	Canola	cytosol, nucleus, plastid	48.6	45.88
AT1G55690.4	Thale cress	nucleus	47.12	45.76
CDY42378	Canola	nucleus	48.43	45.72
KXG29407	Sorghum	cytosol, nucleus, plastid	47.12	45.69
CDY11954	Canola	cytosol	14.66	45.64
PGSC0003DMT400057292	Potato	nucleus	46.46	45.63
CDY11957	Canola	cytosol	33.44	45.62
Bra030841.1-P	Field mustard	nucleus	43.99	44.57
CDY50018	Canola	vacuole	46.46	44.13
Solyc10g005740.1.1	Tomato	nucleus	43.33	42.56
CDY51073	Canola	mitochondrion, nucleus	35.26	41.88
KXG33199	Sorghum	cytosol	41.52	41.65
KXG22454	Sorghum	cytosol	42.17	41.36
AT5G56160.1	Thale cress	cytosol	38.72	40.73
OQU85018	Sorghum	nucleus	41.02	40.62
PGSC0003DMT400022405	Potato	cytosol, nucleus	38.55	40.21
Bra002841.1-P	Field mustard	cytosol	34.27	39.77
CDY51966	Canola	cytosol	38.88	39.66
OQU84321	Sorghum	cytosol	36.74	39.54
OQU88968	Sorghum	cytosol	26.69	39.42
CDY17397	Canola	cytosol	38.55	39.33
CDY36780	Canola	plastid	35.09	37.37
Zm00001d035370_P003	Maize	plastid	20.76	30.88
EER96447	Sorghum	cytosol	14.66	26.57
Bra038012.1-P	Field mustard	cytosol	46.29	26.56
EER90026	Sorghum	cytosol	14.17	26.06
Bra028944.1-P	Field mustard	plastid	29.49	25.72
EES04709	Sorghum	cytosol	13.67	25.38
Zm00001d005778_P001	Maize	plastid	10.05	21.71
Bra002840.1-P	Field mustard	cytosol	0.16	1.3
CDY36781	Canola	extracellular	0.16	0.6

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EntrezGene:8055221	UniProt:C5YJA5	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ProteinID:EES15442.1	InterPro:IPR001251	InterPro:IPR036865
EnsemblPlants:OQU80990	ProteinID:OQU80990	ProteinID:OQU80990.1	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF65	SMART:SM00516	SMART:SM01100	EnsemblPlantsGene:SORBI_3007G219100	SUPFAM:SSF46938
SUPFAM:SSF52087	unigene:Sbi.4407	UniParc:UPI0001A87BB1	RefSeq:XP_002445947.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:-:64728974..64733846

Molecular Weight (calculated)

69494.7 Da

IEP (calculated)

7.361

GRAVY (calculated)

-0.595

Length

607 amino acids

Sequence
(BLAST)

001: MSVSHAEDIE ISLCDGNSED ERRRRKIGSL RRKAIHALKK RGRRRVDFRF PPAAISIEDV RDAEEERAVA SFRERLAAHG LLPEKHDDYH MMLRFLKARK
101: FEAEKAMQMW SEMLKWRKEF GTDTILEDFE FEELDDVLRY YPQGYHGVDR EGRPVYIERL GKVDPNKLMQ ITSVDRYIKY HVQEFERAFR ERFPACTLAA
201: KRHIDSTTTI LDVQGVGFKN FSKTARELVH RMQKIDSDYY PETLHQMFVV NAGSGFKWIW NSVKGFLDPK TSSKIHVLGS NYQSRLLEVI DSSELPEFLG
301: GSCTCSDKGG CLGSNKGPWN DPYILKLIHS LEAGCAREIK PVSEGEERSS SSLRLEQLKW QGMLSDTSNA ESGSDVDDFG PYVQKVSDYG CLTPVHEEVK
401: GTDCATYLSC DDQSHPDMAP ESYHGVRRTT EMVQKPMADF RQYSTNRRPR DLGNNALNVN DTVVERGWEN VVKLVVTALI KLFSFIRLFI SRAEGRLENV
501: NGPARPATPA AEKPKPRVVS DEEVCACLQR IDNLELLCNH LATKPPQIPE DKERILLNSF ERIRSVEADL ERTRRLLNAT VAKQKALVET LESVQESSRV
601: KKRMFCS

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.