CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019582_P001	Maize	cytosol	74.21	95.31
Os07t0456500-01	Rice	cytosol	45.5	78.9
TraesCS2D01G500100.2	Wheat	mitochondrion	74.45	78.26
TraesCS2B01G527900.2	Wheat	mitochondrion	74.45	77.67
TraesCS2A01G499900.1	Wheat	mitochondrion	74.21	77.61
HORVU2Hr1G111160.14	Barley	mitochondrion	73.97	77.16
GSMUA_AchrUn_...	Banana	mitochondrion	47.45	52.56
AT5G47510.4	Thale cress	cytosol	40.88	44.56
CDX77773	Canola	cytosol	43.31	43.73
Bra024938.1-P	Field mustard	cytosol	42.58	43.53
CDY17730	Canola	cytosol	42.58	43.53
VIT_02s0154g00510.t01	Wine grape	cytosol	40.15	42.86
KRH28067	Soybean	cytosol	45.5	40.65
KRH77370	Soybean	cytosol	45.5	40.39
Solyc08g078680.2.1	Tomato	cytosol	45.74	39.17
OQU80990	Sorghum	cytosol	39.42	26.69
KXG33199	Sorghum	cytosol	38.2	25.95
KXG29407	Sorghum	cytosol, nucleus, plastid	39.17	25.72
EER96946	Sorghum	cytosol, nucleus, plastid	36.98	25.38
OQU84321	Sorghum	cytosol	34.79	25.35
KXG40069	Sorghum	nucleus	37.96	24.76
KXG22454	Sorghum	cytosol	36.98	24.56
KXG30865	Sorghum	cytosol	36.01	23.99
OQU85018	Sorghum	nucleus	34.79	23.33
EER90026	Sorghum	cytosol	18.0	22.42
EER96447	Sorghum	cytosol	18.25	22.39
EES04709	Sorghum	cytosol	17.03	21.41

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A1W0W3K0	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	InterPro:IPR001251	InterPro:IPR036865	EnsemblPlants:OQU88968	ProteinID:OQU88968
ProteinID:OQU88968.1	ProteinID:OQU88973.1	PFAM:PF00650	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF63
SMART:SM00516	SMART:SM01100	EnsemblPlantsGene:SORBI_3002G127200	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0009DC8FE5
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:17493869..17500137

Molecular Weight (calculated)

46754.4 Da

IEP (calculated)

8.521

GRAVY (calculated)

-0.399

Length

411 amino acids

Sequence
(BLAST)

001: MSFRSIEQLL RRNSKTKISR NIVDGVHDQK EEQLVQSLRE LLLASNQLPD KFDDYYVLLR FLRMRGFNIL KAKEMFLNML KWREDCSVDA IANDFKFEEY
101: DAVKRCYPHG FHGVDRFGRP LYIERVGLVD LSKLVQVTSI DRYVKYHISE QEKTMSLRYP VCSLVAKRHI ASTTAIFDVK GLGLNNFSKS AREMFAEIQK
201: IDSNYYPETL NQLYIINAGT GFRALWKVLK AFMEARTLAK VQVLGTNYLN TVLKAVDPSN LPDFLGGTCT CPTGGCLLQD KGPWTDPEMV RASKEAFGKG
301: QKSFNELTAT IACESFTGCQ EPSAKQVDST SRKKRTLGML LKDDQVGIDT GENTLRKQVD EQISDKIREL EHCAAQSKET LQTLICKQQE LTGHIEQLRK
401: ILQDGVGADM K

Best Arabidopsis Sequence Match ( AT5G47510.4 )
(BLAST)

001: MMQETDRDIH ISDGTMNKEE QSPNNEEMVE AFRNLLLLHG HLPDKHGDHN TLRRFLKMRD FDLEKSKEAF LNYMKWRVDY KVDLISQKFK FEEYGEVKKH
101: YPHGFHKVDK TGRPIYIERL GMTDLNAFLK ATTIERYVNY HIKEQEKTMS LRYPACSIAS DKHVSSTTTI LDVSGVGMSN FSKPARSLFM EIQKIDSNYY
201: PETLHRLFVV NASSGFRMLW LALKTFLDAR TLAKVQVLGP NYLGELLEAI EPSNLPTFLG GNCTCSDHGG CLFSDEGPWN DPGIKEKIEE PSTIEDAHSE
301: TMDKVSENAP ANQKESLGEV MITMEKYAAL KTAVKDSQKR IEMLEISLHE TKKVLNGLAE IIEAIQPNQP ITKCKPV

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:TAIR;Acc:AT5G47510]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.