CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017876_P018	Maize	cytosol	94.81	94.81
Zm00001d051674_P037	Maize	cytosol	92.06	92.81
Zm00001d012531_P001	Maize	mitochondrion	19.61	92.37
Zm00001d031251_P001	Maize	cytosol, mitochondrion	18.96	90.7
Os02t0721800-01	Rice	cytosol	82.5	83.17
TraesCS6A01G284800.1	Wheat	cytosol	83.31	82.9
TraesCS6D01G265200.1	Wheat	cytosol	82.98	82.71
TraesCS6B01G313500.1	Wheat	cytosol	82.82	82.55
HORVU6Hr1G071770.19	Barley	cytosol	82.66	82.52
GSMUA_Achr4P09770_001	Banana	cytosol	45.7	61.84
GSMUA_Achr3P04130_001	Banana	nucleus	60.78	60.19
GSMUA_Achr5P04200_001	Banana	plastid	58.02	57.28
OQU80990	Sorghum	cytosol	54.62	55.52
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	58.02	54.24
EER96946	Sorghum	cytosol, nucleus, plastid	52.51	54.09
KXG40069	Sorghum	nucleus	54.62	53.49
KRH62508	Soybean	cytosol	49.76	49.52
VIT_19s0015g01160.t01	Wine grape	cytosol	49.76	49.44
KRH45371	Soybean	cytosol	34.85	48.86
KRH56402	Soybean	cytosol	48.78	48.55
Solyc07g066090.2.1	Tomato	nucleus	47.49	47.26
CDY11954	Canola	cytosol	14.91	47.18
KXG29407	Sorghum	cytosol, nucleus, plastid	47.81	47.12
KRH07662	Soybean	cytosol	47.16	47.01
PGSC0003DMT400057292	Potato	nucleus	46.68	46.6
AT1G55690.4	Thale cress	nucleus	47.16	46.56
CDY11957	Canola	cytosol	33.23	46.07
CDY10540	Canola	cytosol, nucleus, plastid	47.97	46.03
CDY42378	Canola	nucleus	47.97	46.03
Solyc10g005740.1.1	Tomato	nucleus	45.7	45.63
Bra030841.1-P	Field mustard	nucleus	43.44	44.74
CDY50018	Canola	vacuole	45.38	43.82
KXG33199	Sorghum	cytosol	42.46	43.31
PGSC0003DMT400022405	Potato	cytosol, nucleus	40.52	42.96
AT5G56160.1	Thale cress	cytosol	39.55	42.29
KXG22454	Sorghum	cytosol	42.3	42.16
CDY51073	Canola	mitochondrion, nucleus	34.85	42.07
Bra002841.1-P	Field mustard	cytosol	35.66	42.06
CDY51966	Canola	cytosol	40.03	41.51
CDY17397	Canola	cytosol	39.87	41.34
OQU85018	Sorghum	nucleus	40.84	41.11
OQU84321	Sorghum	cytosol	35.98	39.36
CDY36780	Canola	plastid	35.01	37.89
OQU88968	Sorghum	cytosol	23.99	36.01
EER96447	Sorghum	cytosol	15.07	27.76
Bra038012.1-P	Field mustard	cytosol	45.22	26.37
Bra028944.1-P	Field mustard	plastid	29.66	26.29
EER90026	Sorghum	cytosol	13.78	25.76
EES04709	Sorghum	cytosol	13.45	25.38
Bra002840.1-P	Field mustard	cytosol	0.32	2.6
CDY36781	Canola	extracellular	0.32	1.19

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	UniProt:A0A194YSQ9	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0006810	GO:GO:0008150	InterPro:IPR001251	InterPro:IPR036865	EnsemblPlants:KXG30865
ProteinID:KXG30865	ProteinID:KXG30865.1	ProteinID:KXG30866.1	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180
PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF73	SMART:SM00516	SMART:SM01100	EnsemblPlantsGene:SORBI_3004G257200
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0007F18D90	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:+:60311765..60318230

Molecular Weight (calculated)

70432.8 Da

IEP (calculated)

7.670

GRAVY (calculated)

-0.590

Length

617 amino acids

Sequence
(BLAST)

001: MSEGNVDSIE ISVSNDERRN RADAEISEDE PRHTRMRSLR KKALHASTRL THSLKKRGKR KVDCRVPRIA IEDVRDAEEE QAVSSFREVL FARGLLPVKH
101: DDYHMMLRFL KARKFDFEKA AQMWADMLQW RKEFGTDTIF EDFEFHELEE VLQYYPHGYH GVDKEGRPVY IELLGKVEPN KLVQITTVER YIKYHVQEFE
201: RAFREKFPAC SISAKRHIDT TTTILDVHGV GWKNFSKIAR DLVRCMQKID GDYYPETLHQ MFIVNAGPGF KLIWSTVKGL LDPKTSSKIH VLGTKYQSKL
301: LEAIDASQLP EYFGGSCTCS NLGGCLRSNK GPWSDPSIMK LVHSMESLKE VGQVSDIEET FTGSMRLRAL KLPERISDTS NAESGSDVDD LGSPVAPEDV
401: EYPSLAPVRE EVRESGSTTY SGLIGMSHTA DKAVGSNRRY NSTGNEIRQF NTEQGSLING GLPAPAGRRA PNDGVGNDDG FLKYISRRVV DVFLRVLSFL
501: RFFIRRRQHL ENVHSHAATA PSNLADLQTI KEDRVNPCLE RLDRLESMFN QLSRKPPELP QDKDRAIQDS FDRIKSIEFD LEKTKKVLHA TVIKQMQMAE
601: TLEAVTEPDL RRRKFCT

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.