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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002841.1-P Field mustard cytosol 87.06 99.04
CDY51966 Canola cytosol 97.31 97.31
AT5G56160.1 Thale cress cytosol 79.16 81.63
CDY11957 Canola cytosol 57.14 76.4
CDY11954 Canola cytosol 22.69 69.23
CDY36780 Canola plastid 65.04 67.89
Zm00001d039981_P001 Maize cytosol 12.94 62.6
HORVU1Hr1G088100.1 Barley cytosol 15.8 58.39
Zm00001d031251_P001 Maize cytosol, mitochondrion 12.27 56.59
HORVU7Hr1G037200.1 Barley nucleus 19.33 53.74
HORVU3Hr1G112740.3 Barley nucleus 19.5 51.79
HORVU7Hr1G040650.2 Barley cytosol, nucleus, plastid 19.16 50.89
Zm00001d012531_P001 Maize mitochondrion 11.09 50.38
CDX99587 Canola cytosol, mitochondrion 23.03 48.41
CDY15888 Canola cytosol 22.69 47.7
CDY42378 Canola nucleus 51.09 47.28
CDY10540 Canola cytosol, nucleus, plastid 50.42 46.66
CDY50018 Canola vacuole 49.24 45.85
GSMUA_Achr4P09770_001 Banana cytosol 34.45 44.96
CDY51073 Canola mitochondrion, nucleus 38.49 44.81
GSMUA_Achr7P06190_001 Banana cytosol 41.34 42.63
Zm00001d045670_P001 Maize cytosol 13.28 42.02
Zm00001d035770_P002 Maize cytosol, endoplasmic reticulum 20.67 41.41
HORVU6Hr1G071770.19 Barley cytosol 42.18 40.61
GSMUA_Achr3P11960_001 Banana cytosol, plastid 41.51 40.49
TraesCS6D01G265200.1 Wheat cytosol 42.02 40.39
TraesCS6A01G284800.1 Wheat cytosol 42.02 40.32
KXG40069 Sorghum nucleus 42.69 40.32
TraesCS6B01G313500.1 Wheat cytosol 41.85 40.23
Zm00001d014589_P001 Maize cytosol 6.55 40.21
Os02t0721800-01 Rice cytosol 41.34 40.2
Os08t0341700-01 Rice nucleus 42.86 40.03
Zm00001d043774_P001 Maize cytosol 5.71 40.0
KXG30865 Sorghum cytosol 41.34 39.87
GSMUA_Achr3P04130_001 Banana nucleus 41.68 39.81
GSMUA_Achr5P04200_001 Banana plastid 41.68 39.68
TraesCS2B01G533900.1 Wheat nucleus 41.85 39.52
TraesCS7D01G238000.2 Wheat cytosol 40.0 39.34
Zm00001d017876_P018 Maize cytosol 40.5 39.06
TraesCS2D01G506400.1 Wheat nucleus 41.51 39.02
Os08t0497300-01 Rice cytosol, plastid 39.5 38.91
EER96946 Sorghum cytosol, nucleus, plastid 39.16 38.9
Os09t0481100-01 Rice nucleus 39.83 38.79
CDY15887 Canola cytosol 35.63 38.62
CDY17730 Canola cytosol 26.05 38.56
OQU80990 Sorghum cytosol 39.33 38.55
Zm00001d051674_P037 Maize cytosol 39.5 38.4
CDX99586 Canola cytosol 35.46 38.36
CDX77773 Canola cytosol 26.22 38.33
CDX90317 Canola cytosol 34.45 38.17
CDY12126 Canola cytosol 34.29 38.13
GSMUA_Achr8P24430_001 Banana endoplasmic reticulum 42.02 37.88
CDX69071 Canola cytosol 33.95 37.83
CDX75444 Canola cytosol 33.95 37.83
CDX89709 Canola cytosol, mitochondrion 28.91 37.8
Zm00001d005995_P003 Maize nucleus 37.65 37.4
CDY52084 Canola cytosol 36.64 37.14
CDY39363 Canola cytosol 36.47 36.66
HORVU7Hr1G048880.11 Barley mitochondrion 39.83 36.63
Zm00001d031316_P020 Maize cytosol 39.5 36.43
CDY45318 Canola cytosol, plastid 30.59 36.4
CDX82040 Canola cytosol 36.13 35.66
CDX90316 Canola cytosol 36.97 35.6
CDY12125 Canola cytosol 36.81 35.55
CDY29415 Canola nucleus 36.64 35.45
CDX77382 Canola cytosol 36.81 35.38
TraesCS7A01G240000.3 Wheat endoplasmic reticulum, plastid 39.83 35.32
CDX68133 Canola cytosol 35.97 35.2
CDX85889 Canola cytosol 35.8 35.09
TraesCS7B01G135600.2 Wheat plastid 39.33 35.08
HORVU1Hr1G091860.1 Barley cytosol 9.58 34.97
CDY17469 Canola cytosol 33.45 34.85
Zm00001d008240_P001 Maize cytosol, extracellular, mitochondrion, nucleus 11.6 34.85
Zm00001d050131_P002 Maize cytosol 37.14 34.59
CDY13810 Canola cytosol 36.64 34.49
Zm00001d045718_P001 Maize cytosol 14.62 34.39
CDX76291 Canola cytosol 33.45 33.61
Zm00001d052840_P016 Maize plastid 40.0 32.83
CDX69225 Canola mitochondrion 32.44 31.8
Zm00001d037983_P001 Maize cytosol 12.27 30.93
Zm00001d010393_P001 Maize plastid 18.66 30.49
Zm00001d047488_P001 Maize nucleus 6.39 23.75
CDY53762 Canola cytosol 12.44 22.63
CDY52903 Canola cytosol 12.44 22.63
CDY40544 Canola cytosol 12.44 22.42
CDY28908 Canola cytosol 12.27 22.05
CDY25949 Canola cytosol 12.27 21.92
CDY41066 Canola cytosol 12.27 21.92
CDY10527 Canola cytosol 11.6 21.23
CDY42389 Canola cytosol 11.6 21.23
CDX77792 Canola cytosol 11.6 20.66
CDY17710 Canola cytosol 11.43 20.36
Zm00001d035370_P003 Maize plastid 11.09 16.18
CDY02262 Canola cytosol, plastid 33.45 13.81
Zm00001d005778_P001 Maize plastid 6.22 13.17
Bra002840.1-P Field mustard cytosol 0.34 2.6
CDY36781 Canola extracellular 0.34 1.19
Protein Annotations
Gene3D:1.10.8.20Gene3D:3.40.525.10MapMan:35.1GO:A0A078FXC3UniProt:A0A078FXC3EnsemblPlants:CDY17397
ProteinID:CDY17397ProteinID:CDY17397.1InterPro:CRAL-TRIO_domInterPro:CRAL-TRIO_dom_sfInterPro:CRAL/TRIO_N_dom_sfGO:GO:0005575
GO:GO:0016020GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00095511001InterPro:IPR001251InterPro:IPR036865PFAM:PF00650
PFscan:PS50191PANTHER:PTHR23324PANTHER:PTHR23324:SF84SMART:SM00516SUPFAM:SSF46938SUPFAM:SSF52087
TMHMM:TMhelixUniParc:UPI0004EE4F95SEG:seg:::
Description
BnaA10g10310DBnaA10g10310D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXC3]
Coordinates
chrLK032072:+:687601..691001
Molecular Weight (calculated)
68296.1 Da
IEP (calculated)
7.609
GRAVY (calculated)
-0.526
Length
595 amino acids
Sequence
(BLAST)
001: MSGREQTRDK LSDSECTEDE PRRSRIGNLR KKAISCSSKL THPLKRKGKR KIDYSVPFIE DVRDENEEKI VLTLRQELLN KDLLPSRHDD YHMLLRFLKT
101: MEFSIEKTVT AWEQMLKWRK EFGADRIIHE FNFKELDKVV RHYPQGYHGV DKDGRPIYIE RLGKAHPGKL MDVTTIERYL KYHVQEFERA LQEKLPACSI
201: AAKRRVTTTT TILDVEGLGM KNFSPTAANL LASIAKVDCN YYPETLHRMF IVNAGIGFRT LLWPAAQKLL DPMTIAKIQV LEPKSLSKLH EAIDSSQLPE
301: FLGGLCKCAN EGGCLRSNKG PWNDPEIIEA CFFVFSLQLV HHMEVNHVQQ TTKTPLHIRD NDSATRMIPP NETLKEEPDS EEYYHSTGSR SPMHTCFVPP
401: HSDKASTSDG DKIITTVESI EPAQGELSQP QSLNTDTESS SSATTSRREG GQVSRYSALR EKIKGENIVH LVKILVAFPL MKLFALFAFL LHGYWQRQNY
501: VPVLHGSSIN NEMILQCLER LKKLEKDFTE TSRIPLKIPE ANEKLLTESL ERIKSLELDL DKTKSVLHIT LTKQLQITEE IESRYQEEQI NRCCF
Best Arabidopsis Sequence Match ( AT5G56160.1 )
(BLAST)
001: MSGREQTGEK LSDSEYIEEE PRRSRIGNLK KKAFSCSTKL THPLKMRKGK RKIDFQIPLI EDVRDEKEEK LVSKLRQQLL QKDLLPPVHD DYHMLLRFLK
101: TMEFKIEKTV TAWEEMLKWR KEFGTDRIIQ DFNFKELDEV TRHYPQGYHG VDKDGRPIYI ERLGKAHPGK LMEVTTIERY LKYHVQEFER TLQEKLPACS
201: VAAKRRVTTT TTILDVEGLG MKNFTPTAAN LLATIAKVDC NYYPETLHRM FIVNAGIGFR SFLWPAAQKL LDPMTIAKIQ VLEPRSLSKL LEAIDSSQLP
301: EFLGGLCKCP NEGGCLRSNK GPWNDPEIVE LVHHMEVNNV PQTTTAPLHV RDYDSTTCTI SPKETLKEEP EPEEYYSSTG SRSSMHTCIV PPLSDKASTS
401: DGDKFITTVE SIESAQSQLL DADTENTFAN TSVREGGQIL RFGALREKIN SENIFHLVKI LLVFPLKLFV LFGFLLPGYW QRQNTVVVPD SSTNNKVLEC
501: FDRLKKMEKE FTEISRKQVK IPEANEKLLA ESLERIKSLE LDLDKTKSVL HITLTKQLQI TEQLESQDEE RRKGCCF
Arabidopsis Description
SFH14Phosphatidylinositol/phosphatidylcholine transfer protein SFH14 [Source:UniProtKB/Swiss-Prot;Acc:F4K6D3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.