Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045718_P001 | Maize | cytosol | 76.29 | 29.25 |
| Zm00001d008240_P001 | Maize | cytosol, extracellular, mitochondrion, nucleus | 48.45 | 23.74 |
| Zm00001d010393_P001 | Maize | plastid | 80.41 | 21.43 |
| Zm00001d047488_P001 | Maize | nucleus | 34.02 | 20.62 |
| Zm00001d045670_P001 | Maize | cytosol | 32.99 | 17.02 |
| Zm00001d035770_P002 | Maize | cytosol, endoplasmic reticulum | 48.45 | 15.82 |
| Zm00001d035370_P003 | Maize | plastid | 63.92 | 15.2 |
| OQU80990 | Sorghum | cytosol | 83.51 | 13.34 |
| Zm00001d031316_P020 | Maize | cytosol | 86.6 | 13.02 |
| Os08t0497300-01 | Rice | cytosol, plastid | 80.41 | 12.91 |
| TraesCS7D01G238000.2 | Wheat | cytosol | 79.38 | 12.73 |
| HORVU7Hr1G048880.11 | Barley | mitochondrion | 79.38 | 11.9 |
| TraesCS7A01G240000.3 | Wheat | endoplasmic reticulum, plastid | 79.38 | 11.48 |
| TraesCS7B01G135600.2 | Wheat | plastid | 78.35 | 11.39 |
| Zm00001d052840_P016 | Maize | plastid | 84.54 | 11.31 |
| Zm00001d005995_P003 | Maize | nucleus | 69.07 | 11.19 |
| Zm00001d037983_P001 | Maize | cytosol | 25.77 | 10.59 |
| Zm00001d019582_P001 | Maize | cytosol | 30.93 | 9.38 |
| CDY11957 | Canola | cytosol | 41.24 | 8.99 |
| GSMUA_Achr4P09770_001 | Banana | cytosol | 41.24 | 8.77 |
| GSMUA_Achr3P04130_001 | Banana | nucleus | 55.67 | 8.67 |
| Zm00001d017876_P018 | Maize | cytosol | 54.64 | 8.59 |
| Zm00001d043774_P001 | Maize | cytosol | 7.22 | 8.24 |
| KRH62508 | Soybean | cytosol | 52.58 | 8.23 |
| Zm00001d051674_P037 | Maize | cytosol | 51.55 | 8.17 |
| KRH56402 | Soybean | cytosol | 51.55 | 8.06 |
| KRH45371 | Soybean | cytosol | 36.08 | 7.95 |
| VIT_19s0015g01160.t01 | Wine grape | cytosol | 50.52 | 7.89 |
| Zm00001d043733_P002 | Maize | mitochondrion | 43.3 | 7.65 |
| GSMUA_Achr8P24430_001 | Banana | endoplasmic reticulum | 51.55 | 7.58 |
| AT1G55690.4 | Thale cress | nucleus | 47.42 | 7.36 |
| GSMUA_Achr5P04200_001 | Banana | plastid | 47.42 | 7.36 |
| CDY50018 | Canola | vacuole | 48.45 | 7.36 |
| Zm00001d015174_P005 | Maize | cytosol | 49.48 | 7.34 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 48.45 | 7.31 |
| Solyc10g005740.1.1 | Tomato | nucleus | 46.39 | 7.28 |
| CDY36780 | Canola | plastid | 42.27 | 7.19 |
| CDY42378 | Canola | nucleus | 47.42 | 7.15 |
| Solyc07g066090.2.1 | Tomato | nucleus | 45.36 | 7.1 |
| PGSC0003DMT400057292 | Potato | nucleus | 44.33 | 6.96 |
| KRH07662 | Soybean | cytosol | 44.33 | 6.95 |
| AT5G56160.1 | Thale cress | cytosol | 41.24 | 6.93 |
| Zm00001d053994_P008 | Maize | cytosol, mitochondrion | 47.42 | 6.91 |
| Zm00001d050131_P002 | Maize | cytosol | 45.36 | 6.89 |
| Zm00001d019834_P003 | Maize | cytosol, extracellular, plastid | 7.22 | 6.86 |
| Zm00001d011663_P003 | Maize | cytosol | 43.3 | 6.84 |
| Zm00001d015785_P001 | Maize | extracellular | 22.68 | 6.73 |
| CDY51966 | Canola | cytosol | 41.24 | 6.72 |
| Zm00001d009439_P004 | Maize | cytosol | 42.27 | 6.63 |
| CDY17397 | Canola | cytosol | 40.21 | 6.55 |
| Zm00001d038880_P001 | Maize | cytosol | 41.24 | 6.47 |
| Zm00001d016601_P006 | Maize | cytosol | 39.18 | 6.28 |
| Zm00001d015175_P002 | Maize | plastid | 40.21 | 6.05 |
| Zm00001d053333_P001 | Maize | cytosol | 7.22 | 5.74 |
| Zm00001d024390_P001 | Maize | cytosol | 7.22 | 5.47 |
| Zm00001d015625_P001 | Maize | cytosol | 7.22 | 5.38 |
| Zm00001d046538_P003 | Maize | cytosol | 21.65 | 5.34 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 18.56 | 5.22 |
| Zm00001d005118_P002 | Maize | cytosol | 20.62 | 5.08 |
| CDY51073 | Canola | mitochondrion, nucleus | 24.74 | 4.7 |
| Bra038012.1-P | Field mustard | cytosol | 48.45 | 4.44 |
| CDY11954 | Canola | cytosol | 8.25 | 4.1 |
| Zm00001d050144_P001 | Maize | cytosol | 7.22 | 4.05 |
| Zm00001d005778_P001 | Maize | plastid | 11.34 | 3.91 |
| Bra030841.1-P | Field mustard | nucleus | 20.62 | 3.34 |
| Zm00001d039981_P001 | Maize | cytosol | 4.12 | 3.25 |
| Zm00001d023995_P002 | Maize | extracellular, golgi, plastid | 7.22 | 2.97 |
| Bra002841.1-P | Field mustard | cytosol | 14.43 | 2.68 |
| PGSC0003DMT400022405 | Potato | cytosol, nucleus | 15.46 | 2.58 |
| Zm00001d020031_P001 | Maize | cytosol | 4.12 | 2.55 |
| Zm00001d031251_P001 | Maize | cytosol, mitochondrion | 3.09 | 2.33 |
| Zm00001d051318_P001 | Maize | cytosol | 4.12 | 2.11 |
| Bra028944.1-P | Field mustard | plastid | 9.28 | 1.29 |
| Zm00001d012531_P001 | Maize | mitochondrion | 1.03 | 0.76 |
| Bra002840.1-P | Field mustard | cytosol | 0.0 | 0.0 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d014589_P001 | EnsemblPlants:Zm00001d014589_T001 | EnsemblPlantsGene:Zm00001d014589 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom_sf | InterPro:IPR036865 |
| PANTHER:PTHR23324 | PANTHER:PTHR23324:SF65 | ProteinID:AQK66596.1 | SUPFAM:SSF52087 | UniParc:UPI00084458C6 | UniProt:A0A1D6GUE6 |
| MapMan:35.1 | : | : | : | : | : |
Description
Phosphatidylinositol/phosphatidylcholine transfer protein SFH13
Coordinates
chr5:+:54446621..54447504
Molecular Weight (calculated)
10528.6 Da
IEP (calculated)
5.078
GRAVY (calculated)
-0.188
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MPVLETHGLV QVLGSIYQSG LLEVIDSSEL PKFLGGSCTC SDKGGCLGSN KGSWNDPYIL KLIHNLEAGC TREIKPVSEG EERNSSSFRL EQMKVTL
001: MTDTMSAHMD RHNKLDYDGS EDEKKTKLCS LKKKAINASN KFKHSFTKRT RRNSRVMSVS IVDDIDLEEL QAVDAFRQAL ILDELLPSKH DDHHMMLRFL
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KNKFDAENTK FIPMIDKTVN ASTWPTNLHK SNYPEPEDLY
401: SAVKPSQRRG GEGYLFGGVM SLVMGLMTVV RLTKNMPRKL TEAAIYGGEV DKAETTMVSN QEYMSMVKRM AELEEKCRSL DNQPAAFSPE KEQILTAALS
501: RVDELELQLA QTKKTLEETM ATQHVIMAYI DKKKKKKKFF GF
101: RARKFDLEKA KQMWTDMIHW RKEFGVDTIM EDFDFKEIDE VLKYYPQGYH GVDKDGRPVY IERLGQVDAT KLMQVTTIDR YVKYHVREFE KTFNIKLPAC
201: SIAAKKHIDQ STTILDVQGV GLKSFSKAAR DLLQRIQKID SDNYPETLNR MFIINAGSGF RLLWSTVKSF LDPKTTAKIH VLGNKYQSKL LEIIDSNELP
301: EFLGGNCTCA DKGGCMRSDK GPWNDPDIFK MVQNGEGKCP RKTLSNIEEK TISVDENTTM KNKFDAENTK FIPMIDKTVN ASTWPTNLHK SNYPEPEDLY
401: SAVKPSQRRG GEGYLFGGVM SLVMGLMTVV RLTKNMPRKL TEAAIYGGEV DKAETTMVSN QEYMSMVKRM AELEEKCRSL DNQPAAFSPE KEQILTAALS
501: RVDELELQLA QTKKTLEETM ATQHVIMAYI DKKKKKKKFF GF
Arabidopsis Description
SFH3Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZE9]
SUBAcon: [vacuole,nucleus,cytosol]
SUBAcon: [vacuole,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.