Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024390_P001 | Maize | cytosol | 99.18 | 94.53 |
| Zm00001d015625_P001 | Maize | cytosol | 97.54 | 91.54 |
| Zm00001d019834_P003 | Maize | cytosol, extracellular, plastid | 75.41 | 90.2 |
| Zm00001d020031_P001 | Maize | cytosol | 67.21 | 52.23 |
| Zm00001d023995_P002 | Maize | extracellular, golgi, plastid | 95.9 | 49.58 |
| Zm00001d050144_P001 | Maize | cytosol | 64.75 | 45.66 |
| Zm00001d051318_P001 | Maize | cytosol | 63.93 | 41.05 |
| Zm00001d015785_P001 | Maize | extracellular | 71.31 | 26.61 |
| Zm00001d043774_P001 | Maize | cytosol | 14.75 | 21.18 |
| Zm00001d046538_P003 | Maize | cytosol | 60.66 | 18.83 |
| Zm00001d039981_P001 | Maize | cytosol | 18.03 | 17.89 |
| Zm00001d031251_P001 | Maize | cytosol, mitochondrion | 18.03 | 17.05 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 47.54 | 16.81 |
| Zm00001d012531_P001 | Maize | mitochondrion | 13.11 | 12.21 |
| Zm00001d005118_P002 | Maize | cytosol | 39.34 | 12.18 |
| Zm00001d008240_P001 | Maize | cytosol, extracellular, mitochondrion, nucleus | 13.93 | 8.59 |
| Zm00001d014589_P001 | Maize | cytosol | 5.74 | 7.22 |
| Zm00001d019582_P001 | Maize | cytosol | 18.85 | 7.19 |
| Zm00001d043733_P002 | Maize | mitochondrion | 24.59 | 5.46 |
| Zm00001d051674_P037 | Maize | cytosol | 24.59 | 4.9 |
| Zm00001d015174_P005 | Maize | cytosol | 26.23 | 4.89 |
| Zm00001d017876_P018 | Maize | cytosol | 24.59 | 4.86 |
| Zm00001d009439_P004 | Maize | cytosol | 24.59 | 4.85 |
| Zm00001d038880_P001 | Maize | cytosol | 24.59 | 4.85 |
| Zm00001d005995_P003 | Maize | nucleus | 23.77 | 4.84 |
| Zm00001d053994_P008 | Maize | cytosol, mitochondrion | 26.23 | 4.8 |
| Zm00001d016601_P006 | Maize | cytosol | 23.77 | 4.79 |
| Zm00001d011663_P003 | Maize | cytosol | 23.77 | 4.72 |
| Zm00001d031316_P020 | Maize | cytosol | 23.77 | 4.5 |
| Zm00001d050131_P002 | Maize | cytosol | 22.13 | 4.23 |
| Zm00001d035770_P002 | Maize | cytosol, endoplasmic reticulum | 9.84 | 4.04 |
| Zm00001d052840_P016 | Maize | plastid | 22.95 | 3.86 |
| Zm00001d015175_P002 | Maize | plastid | 18.85 | 3.57 |
| Zm00001d005778_P001 | Maize | plastid | 4.92 | 2.14 |
| Zm00001d045670_P001 | Maize | cytosol | 3.28 | 2.13 |
| Zm00001d035370_P003 | Maize | plastid | 6.56 | 1.96 |
| Zm00001d010393_P001 | Maize | plastid | 5.74 | 1.92 |
| Zm00001d045718_P001 | Maize | cytosol | 2.46 | 1.19 |
| Zm00001d037983_P001 | Maize | cytosol | 1.64 | 0.85 |
| Zm00001d047488_P001 | Maize | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d053333_P001 | EnsemblPlants:Zm00001d053333_T001 | EnsemblPlantsGene:Zm00001d053333 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom |
| InterPro:CRAL/TRIO_N_dom_sf | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF90 | PFAM:PF03765 | ProteinID:AQK59282.1 |
| ProteinID:AQK59283.1 | SMART:SM01100 | SUPFAM:SSF46938 | UniParc:UPI0008438579 | UniProt:A0A1D6QNY7 | MapMan:35.2 |
Description
Sec14p-like phosphatidylinositol transfer family protein
Coordinates
chr4:+:226564818..226576452
Molecular Weight (calculated)
13855.9 Da
IEP (calculated)
8.811
GRAVY (calculated)
-0.107
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MHQGYPKETL VRFLKAREWN VAKAHKMIVE CLNWRIQNEI DSVLERPIAP VDLYRSICDS QLIGLSGYTK EGLPIFGIGV GHSTYDKASV ITLMLAICLV
101: GYNYSQNHKS VWFEAISTKP NK
101: GYNYSQNHKS VWFEAISTKP NK
001: MGIVSEEAID EFQELMDQVE EPLKKTYERV HQGYLRENLG RFLKARDWNV CKAHTMLVEC LRWRVDNEID SILSKPIVPT ELYRDVRDSQ LIGMSGYTKE
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L
101: GLPVFAIGVG LSTFDKASVH YYVQSHIQIN EYRDRVLLPS ISKKNGRPIT TCVKVLDMTG LKLSALSQIK LVTIISTIDD LNYPEKTNTY YVVNAPYIFS
201: ACWKVVKPLL QERTRKKVHV LSGCGRDELL KIMDFTSLPH FCRSGSSGSS HHTQSANCFS INHPFHQQLY NYVKHHYETQ GQAEPAKQGS FHVGFPEPEA
301: ERCVIAKTIE SELHKFENRN GLAVSIDDRK SSHETLANGD L
Arabidopsis Description
At5g47730 [Source:UniProtKB/TrEMBL;Acc:Q9FIK6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.