Factsheet for Zm00001d037983_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045670_P001	Maize	cytosol	41.1	51.6
Zm00001d045718_P001	Maize	cytosol	38.14	35.57
Zm00001d039981_P001	Maize	cytosol	18.22	34.96
Zm00001d035770_P002	Maize	cytosol, endoplasmic reticulum	40.25	31.99
Zm00001d008240_P001	Maize	cytosol, extracellular, mitochondrion, nucleus	22.46	26.77
Zm00001d014589_P001	Maize	cytosol	10.59	25.77
Zm00001d010393_P001	Maize	plastid	37.71	24.45
CDY11954	Canola	cytosol	18.22	22.05
Zm00001d031251_P001	Maize	cytosol, mitochondrion	11.44	20.93
Zm00001d019582_P001	Maize	cytosol	27.12	20.0
OQU80990	Sorghum	cytosol	47.88	18.62
GSMUA_Achr4P09770_001	Banana	cytosol	35.59	18.42
Os08t0497300-01	Rice	cytosol, plastid	47.03	18.38
Zm00001d005995_P003	Maize	nucleus	45.76	18.03
TraesCS7D01G238000.2	Wheat	cytosol	46.19	18.02
Zm00001d031316_P020	Maize	cytosol	47.46	17.36
HORVU7Hr1G048880.11	Barley	mitochondrion	46.19	16.85
TraesCS7B01G135600.2	Wheat	plastid	45.76	16.19
TraesCS7A01G240000.3	Wheat	endoplasmic reticulum, plastid	45.76	16.1
CDY11957	Canola	cytosol	30.08	15.96
Zm00001d051674_P037	Maize	cytosol	39.41	15.2
Zm00001d052840_P016	Maize	plastid	46.61	15.17
Zm00001d017876_P018	Maize	cytosol	39.41	15.07
GSMUA_Achr5P04200_001	Banana	plastid	39.41	14.88
KRH45371	Soybean	cytosol	27.54	14.77
GSMUA_Achr3P04130_001	Banana	nucleus	38.98	14.77
Zm00001d043733_P002	Maize	mitochondrion	34.32	14.75
Zm00001d015174_P005	Maize	cytosol	39.41	14.22
Zm00001d038880_P001	Maize	cytosol	36.86	14.08
VIT_19s0015g01160.t01	Wine grape	cytosol	36.86	14.01
CDY10540	Canola	cytosol, nucleus, plastid	37.71	13.84
Zm00001d053994_P008	Maize	cytosol, mitochondrion	38.98	13.81
GSMUA_Achr8P24430_001	Banana	endoplasmic reticulum	38.56	13.79
AT1G55690.4	Thale cress	nucleus	36.44	13.76
Zm00001d009439_P004	Maize	cytosol	36.02	13.75
Zm00001d012531_P001	Maize	mitochondrion	7.63	13.74
Zm00001d016601_P006	Maize	cytosol	35.17	13.72
CDY42378	Canola	nucleus	37.29	13.69
Zm00001d011663_P003	Maize	cytosol	35.17	13.52
KRH62508	Soybean	cytosol	35.17	13.39
KRH56402	Soybean	cytosol	35.17	13.39
CDY51073	Canola	mitochondrion, nucleus	28.81	13.31
PGSC0003DMT400057292	Potato	nucleus	34.32	13.11
Solyc07g066090.2.1	Tomato	nucleus	34.32	13.06
Bra030841.1-P	Field mustard	nucleus	33.05	13.02
KRH07662	Soybean	cytosol	33.9	12.92
Zm00001d015175_P002	Maize	plastid	35.17	12.87
CDY50018	Canola	vacuole	34.75	12.83
Solyc10g005740.1.1	Tomato	nucleus	32.63	12.46
CDY36780	Canola	plastid	30.08	12.46
CDY17397	Canola	cytosol	30.93	12.27
CDY51966	Canola	cytosol	30.93	12.27
Bra002841.1-P	Field mustard	cytosol	27.12	12.24
AT5G56160.1	Thale cress	cytosol	29.24	11.96
Zm00001d050131_P002	Maize	cytosol	32.2	11.89
Zm00001d015785_P001	Maize	extracellular	14.83	10.7
Zm00001d047488_P001	Maize	nucleus	7.2	10.62
PGSC0003DMT400022405	Potato	cytosol, nucleus	25.85	10.48
Zm00001d053648_P005	Maize	cytosol, endoplasmic reticulum, plastid	14.83	10.14
Zm00001d005118_P002	Maize	cytosol	16.1	9.64
Zm00001d046538_P003	Maize	cytosol	14.83	8.91
Bra028944.1-P	Field mustard	plastid	22.88	7.76
Bra038012.1-P	Field mustard	cytosol	34.32	7.66
Zm00001d035370_P003	Maize	plastid	10.59	6.13
Zm00001d005778_P001	Maize	plastid	6.36	5.34
Zm00001d050144_P001	Maize	cytosol	1.69	2.31
Zm00001d019834_P003	Maize	cytosol, extracellular, plastid	0.85	1.96
Zm00001d053333_P001	Maize	cytosol	0.85	1.64
Zm00001d024390_P001	Maize	cytosol	0.85	1.56
Zm00001d015625_P001	Maize	cytosol	0.85	1.54
Zm00001d020031_P001	Maize	cytosol	0.85	1.27
Zm00001d023995_P002	Maize	extracellular, golgi, plastid	0.85	0.85
Zm00001d051318_P001	Maize	cytosol	0.42	0.53
Zm00001d043774_P001	Maize	cytosol	0.0	0.0
CDY36781	Canola	extracellular	0.0	0.0
Bra002840.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d037983_P001	EnsemblPlants:Zm00001d037983_T001	EnsemblPlantsGene:Zm00001d037983	Gene3D:3.40.525.10	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf
InterPro:IPR001251	InterPro:IPR036865	PANTHER:PTHR23324	PANTHER:PTHR23324:SF65	PFAM:PF00650	ProteinID:AQK85427.1
SEG:seg	SUPFAM:SSF52087	UniParc:UPI0008427F8A	UniProt:A0A1D6M2L7	MapMan:35.1	:

Description

Phosphatidylinositol/phosphatidylcholine transfer protein SFH13

Coordinates

chr6:-:144371484..144378333

Molecular Weight (calculated)

27428.1 Da

IEP (calculated)

9.274

GRAVY (calculated)

-0.192

Length

236 amino acids

Sequence
(BLAST)

001: MQITSVDRYI KYHVQEFERA FRERFTACTL AAKRNIDSTT TILDVQGAGF KNFSKTAREL VHRMQKIDSD YYPEVIILFN VRIDLRSNSH FAPKGVDIYF
101: LLVEGFKNFS KTARELVHRM QKIDSDYYPE VLGSNYQSML LEVIDSSVIA LALDLRLEQL LVFCRGMSSS LQLSALLQSI TNRGGSCFKT VEQIAKFIWA
201: QQRLVQWRPC EWWLSGPPVQ APSRRNGYIR INYYDV

Best Arabidopsis Sequence Match ( AT4G39170.2 )
(BLAST)

001: MSGPVDRFAI PCFEGILSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KRRKSDVRVS SVSIEDVRDV EELQAVDEFR QALVMEELLP
101: HKHDDYHMML RFLKARKFDI EKAKHMWADM IQWRKEFGTD TIIQDFQFEE IDEVLKYYPH GYHSVDKEGR PVYIERLGKV DPNKLMQVTT LDRYIRYHVK
201: EFERSFMLKF PACTIAAKKY IDSSTTILDV QGVGLKNFTK SARELITRLQ KIDGDNYPET LHQMFIINAG PGFRLLWSTV KSFLDPKTTS KIHVLGCKYQ
301: SKLLEIIDSS ELPEFLGGAC TCADQGGCML SDKGPWKNPE IMVLHGGAHR AKQVVKVLNS DGKVIAYAKP SYPWIKGSDT STAESGSEAE DIVVSPKAVK
401: SYSHLRLTPV REEAKVGSGE TSFAGSFAGY DEYVPMVDKA VDATWKVKPT AINRAPSKGA HMPPNVPKDH ESFSARVLVT FMAFVMAILT FFRTVSNRVV
501: TKQLPPPPSQ PQIEGSAAAE EADLLNSVLK KLTELEEKIG ALQSKPSEMP YEKEELLNAA VCRVDALEAE LIATKKALYE ALMRQEELLA YIDRQEAAQH
601: QKKNKRKQMF CF

Arabidopsis Description

SFH6Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 [Source:UniProtKB/Swiss-Prot;Acc:F4JVA6]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.