Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d014589_P001 | Maize | cytosol | 29.25 | 76.29 |
| Zm00001d010393_P001 | Maize | plastid | 98.02 | 68.13 |
| Zm00001d045670_P001 | Maize | cytosol | 38.34 | 51.6 |
| Zm00001d008240_P001 | Maize | cytosol, extracellular, mitochondrion, nucleus | 35.97 | 45.96 |
| Zm00001d047488_P001 | Maize | nucleus | 26.88 | 42.5 |
| Zm00001d037983_P001 | Maize | cytosol | 35.57 | 38.14 |
| Zm00001d035770_P002 | Maize | cytosol, endoplasmic reticulum | 43.87 | 37.37 |
| OQU80990 | Sorghum | cytosol | 87.35 | 36.41 |
| Os08t0497300-01 | Rice | cytosol, plastid | 79.05 | 33.11 |
| Zm00001d052840_P016 | Maize | plastid | 94.86 | 33.1 |
| Zm00001d031316_P020 | Maize | cytosol | 84.19 | 33.02 |
| TraesCS7D01G238000.2 | Wheat | cytosol | 75.89 | 31.74 |
| Zm00001d039981_P001 | Maize | cytosol | 15.41 | 31.71 |
| TraesCS7A01G240000.3 | Wheat | endoplasmic reticulum, plastid | 75.49 | 28.46 |
| TraesCS7B01G135600.2 | Wheat | plastid | 74.7 | 28.34 |
| HORVU7Hr1G048880.11 | Barley | mitochondrion | 72.33 | 28.28 |
| Zm00001d005995_P003 | Maize | nucleus | 63.24 | 26.71 |
| Zm00001d035370_P003 | Maize | plastid | 42.29 | 26.23 |
| GSMUA_Achr4P09770_001 | Banana | cytosol | 43.08 | 23.9 |
| CDY11954 | Canola | cytosol | 17.79 | 23.08 |
| Zm00001d019582_P001 | Maize | cytosol | 28.06 | 22.19 |
| Zm00001d017876_P018 | Maize | cytosol | 51.78 | 21.23 |
| Zm00001d031251_P001 | Maize | cytosol, mitochondrion | 10.67 | 20.93 |
| Zm00001d051674_P037 | Maize | cytosol | 50.59 | 20.91 |
| GSMUA_Achr3P04130_001 | Banana | nucleus | 48.22 | 19.58 |
| Zm00001d050131_P002 | Maize | cytosol | 48.62 | 19.25 |
| KRH62508 | Soybean | cytosol | 47.04 | 19.19 |
| KRH56402 | Soybean | cytosol | 46.64 | 19.03 |
| KRH45371 | Soybean | cytosol | 32.81 | 18.86 |
| VIT_19s0015g01160.t01 | Wine grape | cytosol | 45.45 | 18.52 |
| GSMUA_Achr5P04200_001 | Banana | plastid | 45.45 | 18.4 |
| KRH07662 | Soybean | cytosol | 44.27 | 18.09 |
| GSMUA_Achr8P24430_001 | Banana | endoplasmic reticulum | 47.04 | 18.03 |
| Zm00001d038880_P001 | Maize | cytosol | 43.48 | 17.8 |
| Solyc07g066090.2.1 | Tomato | nucleus | 43.48 | 17.74 |
| Zm00001d015174_P005 | Maize | cytosol | 45.85 | 17.74 |
| PGSC0003DMT400057292 | Potato | nucleus | 43.08 | 17.64 |
| Zm00001d009439_P004 | Maize | cytosol | 42.69 | 17.48 |
| Zm00001d053994_P008 | Maize | cytosol, mitochondrion | 45.45 | 17.27 |
| CDY10540 | Canola | cytosol, nucleus, plastid | 43.48 | 17.11 |
| CDY11957 | Canola | cytosol | 30.04 | 17.08 |
| AT1G55690.4 | Thale cress | nucleus | 41.9 | 16.96 |
| CDY42378 | Canola | nucleus | 43.08 | 16.95 |
| Zm00001d011663_P003 | Maize | cytosol | 41.11 | 16.94 |
| Zm00001d043733_P002 | Maize | mitochondrion | 35.57 | 16.39 |
| Solyc10g005740.1.1 | Tomato | nucleus | 39.53 | 16.18 |
| Zm00001d005778_P001 | Maize | plastid | 17.39 | 15.66 |
| CDY50018 | Canola | vacuole | 39.53 | 15.65 |
| CDY51073 | Canola | mitochondrion, nucleus | 30.83 | 15.26 |
| Zm00001d016601_P006 | Maize | cytosol | 36.36 | 15.21 |
| CDY51966 | Canola | cytosol | 34.78 | 14.79 |
| AT5G56160.1 | Thale cress | cytosol | 33.6 | 14.73 |
| CDY17397 | Canola | cytosol | 34.39 | 14.62 |
| CDY36780 | Canola | plastid | 31.23 | 13.86 |
| Bra030841.1-P | Field mustard | nucleus | 32.81 | 13.86 |
| Zm00001d015175_P002 | Maize | plastid | 35.18 | 13.8 |
| Zm00001d012531_P001 | Maize | mitochondrion | 6.72 | 12.98 |
| PGSC0003DMT400022405 | Potato | cytosol, nucleus | 28.46 | 12.37 |
| Bra002841.1-P | Field mustard | cytosol | 24.11 | 11.66 |
| Zm00001d015785_P001 | Maize | extracellular | 13.83 | 10.7 |
| Zm00001d053648_P005 | Maize | cytosol, endoplasmic reticulum, plastid | 13.44 | 9.86 |
| Zm00001d005118_P002 | Maize | cytosol | 15.02 | 9.64 |
| Bra038012.1-P | Field mustard | cytosol | 39.53 | 9.45 |
| Zm00001d046538_P003 | Maize | cytosol | 14.62 | 9.41 |
| Bra028944.1-P | Field mustard | plastid | 18.58 | 6.75 |
| Zm00001d019834_P003 | Maize | cytosol, extracellular, plastid | 1.19 | 2.94 |
| Zm00001d053333_P001 | Maize | cytosol | 1.19 | 2.46 |
| Zm00001d024390_P001 | Maize | cytosol | 1.19 | 2.34 |
| Zm00001d050144_P001 | Maize | cytosol | 1.58 | 2.31 |
| Zm00001d015625_P001 | Maize | cytosol | 1.19 | 2.31 |
| Zm00001d020031_P001 | Maize | cytosol | 1.19 | 1.91 |
| Zm00001d023995_P002 | Maize | extracellular, golgi, plastid | 1.19 | 1.27 |
| Zm00001d051318_P001 | Maize | cytosol | 0.4 | 0.53 |
| CDY36781 | Canola | extracellular | 0.0 | 0.0 |
| Zm00001d043774_P001 | Maize | cytosol | 0.0 | 0.0 |
| Bra002840.1-P | Field mustard | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Zm00001d045718_P001 | EnsemblPlants:Zm00001d045718_T001 | EnsemblPlantsGene:Zm00001d045718 | Gene3D:3.40.525.10 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf |
| InterPro:IPR001251 | InterPro:IPR036865 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF65 | ProteinID:AQL03033.1 | SEG:seg |
| SUPFAM:SSF52087 | UniParc:UPI00084375AD | UniProt:A0A1D6NYG6 | MapMan:35.1 | : | : |
Description
Phosphatidylinositol/phosphatidylcholine transfer protein SFH13
Coordinates
chr9:-:34930085..34931686
Molecular Weight (calculated)
28556.6 Da
IEP (calculated)
5.185
GRAVY (calculated)
-0.535
Length
253 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSQMDRYIK YHVQEFDRAF RERFPACTLA AKRHIDSTTT ILDVQGVGFK NFSRTARELV NRMQKIDSDY YPEVIILFEG VLGSNYQSRL LEVIDSSELP
101: ELLGGSCTCS DKGGCLGSNK GPWNDPYILK LIHNLEAGCM RETTKPVSEG GERSSSSFRL EQMKWQGMLS DISNAESGSD VDDFGPSFVH KVSGYGCLTP
201: VREEVKGTDC ATYLSCDDQS HPDMVPEFYH GVQRTTEMVQ KQMADFRQYS TNR
101: ELLGGSCTCS DKGGCLGSNK GPWNDPYILK LIHNLEAGCM RETTKPVSEG GERSSSSFRL EQMKWQGMLS DISNAESGSD VDDFGPSFVH KVSGYGCLTP
201: VREEVKGTDC ATYLSCDDQS HPDMVPEFYH GVQRTTEMVQ KQMADFRQYS TNR
001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.