Skip to main content
crop-pal logo
Field mustard
Search for another protein from :
Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • mitochondrion 2
  • cytosol 3
  • nucleus 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:cytosol, extracellular, nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028944.1-P Field mustard plastid 76.62 8.48
Bra038012.1-P Field mustard cytosol 25.97 1.89
AT5G56160.1 Thale cress cytosol 3.9 0.52
CDY51966 Canola cytosol 3.9 0.5
Bra024938.1-P Field mustard cytosol 2.6 0.5
Bra002841.1-P Field mustard cytosol 2.6 0.38
Bra015089.1-P Field mustard cytosol 2.6 0.37
CDY17397 Canola cytosol 2.6 0.34
Os02t0721800-01 Rice cytosol 2.6 0.33
Zm00001d051674_P037 Maize cytosol 2.6 0.33
KXG30865 Sorghum cytosol 2.6 0.32
Zm00001d017876_P018 Maize cytosol 2.6 0.32
HORVU6Hr1G071770.19 Barley cytosol 2.6 0.32
TraesCS6D01G265200.1 Wheat cytosol 2.6 0.32
TraesCS6B01G313500.1 Wheat cytosol 2.6 0.32
TraesCS6A01G284800.1 Wheat cytosol 2.6 0.32
GSMUA_Achr3P04130_001 Banana nucleus 2.6 0.32
Zm00001d050131_P002 Maize cytosol 2.6 0.31
Zm00001d052840_P016 Maize plastid 2.6 0.28
GSMUA_Achr7P06190_001 Banana cytosol 1.3 0.17
Zm00001d005995_P003 Maize nucleus 1.3 0.17
Bra030841.1-P Field mustard nucleus 1.3 0.17
EER96946 Sorghum cytosol, nucleus, plastid 1.3 0.17
Os08t0497300-01 Rice cytosol, plastid 1.3 0.17
TraesCS7D01G238000.2 Wheat cytosol 1.3 0.17
OQU80990 Sorghum cytosol 1.3 0.16
GSMUA_Achr3P11960_001 Banana cytosol, plastid 1.3 0.16
Os09t0481100-01 Rice nucleus 1.3 0.16
Bra010700.1-P Field mustard cytosol 1.3 0.16
TraesCS2B01G533900.1 Wheat nucleus 1.3 0.16
KXG40069 Sorghum nucleus 1.3 0.16
Bra031196.1-P Field mustard cytosol 1.3 0.16
TraesCS2D01G506400.1 Wheat nucleus 1.3 0.16
Os08t0341700-01 Rice nucleus 1.3 0.16
Zm00001d031316_P020 Maize cytosol 1.3 0.16
HORVU7Hr1G048880.11 Barley mitochondrion 1.3 0.15
TraesCS7B01G135600.2 Wheat plastid 1.3 0.15
TraesCS7A01G240000.3 Wheat endoplasmic reticulum, plastid 1.3 0.15
Bra013077.1-P Field mustard cytosol, plastid 1.3 0.07
Bra003757.1-P Field mustard cytosol 0.0 0.0
Zm00001d037983_P001 Maize cytosol 0.0 0.0
Bra010699.1-P Field mustard cytosol 0.0 0.0
Zm00001d008240_P001 Maize cytosol, extracellular, mitochondrion, nucleus 0.0 0.0
Zm00001d010393_P001 Maize plastid 0.0 0.0
Zm00001d047488_P001 Maize nucleus 0.0 0.0
Zm00001d045718_P001 Maize cytosol 0.0 0.0
Zm00001d045670_P001 Maize cytosol 0.0 0.0
Zm00001d012531_P001 Maize mitochondrion 0.0 0.0
Zm00001d043774_P001 Maize cytosol 0.0 0.0
Zm00001d039981_P001 Maize cytosol 0.0 0.0
Zm00001d014589_P001 Maize cytosol 0.0 0.0
Bra011544.1-P Field mustard cytosol, plastid 0.0 0.0
Zm00001d031251_P001 Maize cytosol, mitochondrion 0.0 0.0
Zm00001d035370_P003 Maize plastid 0.0 0.0
Zm00001d035770_P002 Maize cytosol, endoplasmic reticulum 0.0 0.0
HORVU1Hr1G091860.1 Barley cytosol 0.0 0.0
Bra034638.1-P Field mustard cytosol 0.0 0.0
Bra038021.1-P Field mustard cytosol 0.0 0.0
Bra030831.1-P Field mustard cytosol 0.0 0.0
Bra030295.1-P Field mustard cytosol 0.0 0.0
Bra030294.1-P Field mustard cytosol, nucleus, plastid 0.0 0.0
GSMUA_Achr4P09770_001 Banana cytosol 0.0 0.0
GSMUA_Achr5P04200_001 Banana plastid 0.0 0.0
GSMUA_Achr8P24430_001 Banana endoplasmic reticulum 0.0 0.0
HORVU1Hr1G088100.1 Barley cytosol 0.0 0.0
Zm00001d005778_P001 Maize plastid 0.0 0.0
HORVU3Hr1G112740.3 Barley nucleus 0.0 0.0
Bra025754.1-P Field mustard nucleus 0.0 0.0
HORVU7Hr1G037200.1 Barley nucleus 0.0 0.0
HORVU7Hr1G040650.2 Barley cytosol, nucleus, plastid 0.0 0.0
Bra024920.1-P Field mustard cytosol 0.0 0.0
Bra022153.1-P Field mustard cytosol 0.0 0.0
Bra017663.1-P Field mustard cytosol, plastid 0.0 0.0
Bra017468.1-P Field mustard cytosol 0.0 0.0
Protein Annotations
EnsemblPlants:Bra002840.1EnsemblPlants:Bra002840.1-PEnsemblPlantsGene:Bra002840PANTHER:PTHR31533PANTHER:PTHR31533:SF2SEG:seg
UniParc:UPI0002544856UniProt:M4CF58MapMan:11.10.2.4.3:::
Description
AT5G56170 (E=4e-024) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: LRE (LORELEI) (TAIR:AT4G26466.1); Has 71 Blast hits to 71 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA10:+:7204126..7204359
Molecular Weight (calculated)
8636.4 Da
IEP (calculated)
8.670
GRAVY (calculated)
-0.558
Length
77 amino acids
Sequence
(BLAST)
1: MNYTIITSQC KGPKYPPKKC CSAFKEFACP YADQLNDFRN DCATTMFSYI NLYGKYPPGL FANSCQEKGG LKCPGQK
Best Arabidopsis Sequence Match ( AT5G56170.1 )
(BLAST)
001: MELLSRALFF FLLLSVLSSF SSSSFISDGV FESQSLVLGR NLLQTKKTCP VNFEFMNYTI ITSKCKGPKY PPKECCGAFK DFACPYTDQL NDLSSDCATT
101: MFSYINLYGK YPPGLFANQC KEGKEGLECP AGSQLPPETS AEVNAATTSS SRLWLTVSAA LLVFVKLF
Arabidopsis Description
LLG1LLG1 [Source:UniProtKB/TrEMBL;Acc:A0A178USL6]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.