Factsheet for Bra015089.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77382	Canola	cytosol	99.07	85.62
AT3G24840.3	Thale cress	cytosol	76.07	70.17
VIT_07s0005g06640.t01	Wine grape	endoplasmic reticulum	50.28	44.03
KRG99773	Soybean	cytosol, nucleus, plastid	48.6	43.77
KRH46724	Soybean	cytosol, nucleus, plastid	47.48	42.76
Solyc09g060090.2.1	Tomato	cytosol	46.36	41.82
PGSC0003DMT400045517	Potato	cytosol	46.17	41.65
GSMUA_Achr9P01730_001	Banana	plastid	24.49	37.97
Bra030295.1-P	Field mustard	cytosol	18.5	34.98
GSMUA_Achr6P06610_001	Banana	mitochondrion	26.92	33.1
Bra030294.1-P	Field mustard	cytosol, nucleus, plastid	29.72	32.58
Bra030841.1-P	Field mustard	nucleus	36.26	32.39
Bra002841.1-P	Field mustard	cytosol	31.59	32.31
Bra010699.1-P	Field mustard	cytosol	31.03	30.91
Bra011544.1-P	Field mustard	cytosol, plastid	28.6	30.91
Bra031196.1-P	Field mustard	cytosol	35.7	30.22
Bra010700.1-P	Field mustard	cytosol	34.58	29.94
Bra017663.1-P	Field mustard	cytosol, plastid	25.42	29.82
Bra003757.1-P	Field mustard	cytosol	34.58	29.27
Bra034638.1-P	Field mustard	cytosol	29.35	28.86
Bra025754.1-P	Field mustard	nucleus	32.15	28.2
Bra024938.1-P	Field mustard	cytosol	19.81	26.37
Bra028944.1-P	Field mustard	plastid	29.53	22.7
Bra038012.1-P	Field mustard	cytosol	37.2	18.81
Bra038021.1-P	Field mustard	cytosol	11.21	18.35
Bra030831.1-P	Field mustard	cytosol	10.65	17.54
Bra017468.1-P	Field mustard	cytosol	10.65	17.12
Bra022153.1-P	Field mustard	cytosol	10.47	16.92
Bra024920.1-P	Field mustard	cytosol	10.09	16.17
Bra013077.1-P	Field mustard	cytosol, plastid	28.97	10.62
Bra002840.1-P	Field mustard	cytosol	0.37	2.6

Protein Annotations

Gene3D:1.10.8.20	Gene3D:3.40.525.10	MapMan:35.1	EnsemblPlantsGene:Bra015089	EnsemblPlants:Bra015089.1	EnsemblPlants:Bra015089.1-P
InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	ncoils:Coil	InterPro:IPR001251
InterPro:IPR036865	UniProt:M4DF17	PFAM:PF00650	PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324
PANTHER:PTHR23324:SF100	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI0002540BFB
SEG:seg	:	:	:	:	:

Description

AT3G24840 (E=1e-110) | SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative

Coordinates

chrA07:-:3574692..3580007

Molecular Weight (calculated)

61430.7 Da

IEP (calculated)

8.863

GRAVY (calculated)

-0.633

Length

535 amino acids

Sequence
(BLAST)

001: MCTSLTKKNK RNEANFDSYV GDFTEVDTPK TGFKPLGEIL SVPETDKGKS KDIIDNSEDE KILPRAPRGS RSLKKKAIKA SSKLTHSLRK RGKRVADQYA
101: AIVIEDVRDA EEEKAVYAFR EALVSLDLLP PRHDDYHTML RFLKARRFDH DKTVHMWEEM LKWRRENGVD TIMQDFVYEE YEEVQQYYPH GYHGVDREGR
201: PVYIERLGKV DPGKLMKVTS LERFLRYHVQ GFEKTFSEKF PACSIAAKRH INSSTTIIDV QGVSWMKLRK LAQDLVMRMQ KIDGDNYPEL VRLRDATYKV
301: KEIELPENGE VAKLFALPHV NTEISLPDGG QVRVRESHFE HDTSAQLSHQ LEAVGTGRIV QSDSTNQLSS NLTEERGLKK SLQKVASSLA RFIFQLVASL
401: CLMFRILGSL VNKKPENQLR PPVLDSPPPP PPPTQLLQRG ESLHPCWQRL QNLESMVTVL FDKPTNIPQE KEDILRDSLD RIKGIEQDLQ KTKKALLLTA
501: SKQLELAESF ESLKESTSMG MRSCWPRHCR NFQVE

Best Arabidopsis Sequence Match ( AT3G24840.2 )
(BLAST)

001: MPALGEILLV PETDKGKSKD YIEVSEDEKI TRTRSRSLKK KAIKASNKLT HSLRKRGKRV ADQYAPIVIE DVRDEEEEKA VNVFRKALVS LDLLPPRHDD
101: YHTMLRFLKA RRFDLEKTVQ MWEEMLKWRK ENGVDTIIQD FVYDEYEEVQ QYYPHGYHGV DREGRPVYIE RLGKIDPGKL MKVTTLERFL RYHVQGFEKT
201: FSEKFPACSI AAKRHINSST TIIDVHGVSW MSFRKLAQDL VMRMQKIDGD NYPETLNQMY IINAGNGFKL VWNTVKGFLD PKTTSKIHVL GNKYRSHLLE
301: IIDPSELPEF LGGNCKCAHE GGCMRFNKGP WNDPEIMKLV RSRDAMYKPK EMGLLENGEV AKLFSLRHVN TDMSSPDGGH VRERESHPEH DKRAQLSNQA
401: EAVGVGRMEQ SDSTSPLPNN LAVERSLTTS LQKVASFLAR FILQLLGSLC LMFRILGRLV NKQPENQLRP ELSVSVSQQQ VPPPQVHPCW LRLQNLETMV
501: TVLCDKPSSI PQEKEDILRD SLDRIKSIEQ DLQKTKKALF LTASKQIELA ECFENLKESS STGMRSCWPR HCRNFQAET

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.