Factsheet for VIT_07s0005g06640.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 1
cytosol 2
extracellular 4
endoplasmic reticulum 6
vacuole 4
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99773	Soybean	cytosol, nucleus, plastid	62.03	63.8
KRH46724	Soybean	cytosol, nucleus, plastid	61.87	63.64
PGSC0003DMT400045517	Potato	cytosol	59.57	61.38
Solyc09g060090.2.1	Tomato	cytosol	59.25	61.05
AT3G24840.3	Thale cress	cytosol	53.36	56.21
CDY52084	Canola	cytosol	53.03	55.2
GSMUA_Achr9P01730_001	Banana	plastid	30.11	53.33
CDX77382	Canola	cytosol	53.85	53.15
Bra015089.1-P	Field mustard	cytosol	44.03	50.28
VIT_19s0015g01160.t01	Wine grape	cytosol	48.28	47.5
VIT_03s0038g04470.t01	Wine grape	cytosol	44.19	43.2
GSMUA_Achr6P06610_001	Banana	mitochondrion	30.61	42.99
VIT_18s0001g12950.t01	Wine grape	cytosol	42.39	41.57
VIT_03s0038g04480.t01	Wine grape	cytosol	38.46	37.9
VIT_04s0023g02400.t01	Wine grape	cytosol, nucleus, plastid	32.41	36.94
VIT_02s0154g00510.t01	Wine grape	cytosol	22.42	35.58
VIT_10s0116g00400.t01	Wine grape	cytosol	15.22	27.51
VIT_19s0015g00760.t01	Wine grape	cytosol	13.42	24.26

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100265430	wikigene:100265430	Gene3D:3.40.525.10	MapMan:35.1	ProteinID:CBI37336
ProteinID:CBI37336.3	InterPro:CRAL-TRIO_dom	InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	UniProt:D7U3L7
EMBL:FN596502	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001251	InterPro:IPR036865
EntrezGene:LOC100265430	wikigene:LOC100265430	PFAM:PF00650	PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191
PANTHER:PTHR23324	PANTHER:PTHR23324:SF100	SMART:SM00516	SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087
SignalP:SignalP-noTM	TIGR:TC69474	TMHMM:TMhelix	UniParc:UPI0001BE4AED	ArrayExpress:VIT_07s0005g06640	EnsemblPlantsGene:VIT_07s0005g06640
EnsemblPlants:VIT_07s0005g06640.t01	unigene:Vvi.24920	unigene:Vvi.7975	RefSeq:XP_002271106	RefSeq:XP_002271106.2	RefSeq:XP_010652518.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:+:12007090..12026564

Molecular Weight (calculated)

69479.4 Da

IEP (calculated)

8.060

GRAVY (calculated)

-0.424

Length

611 amino acids

Sequence
(BLAST)

001: MVFDSHSGLL LLIFFTGEIV AVAEDEKGRR SDPETSEDER PRRRIRSLKK KAMSASTRFT HTLRKCGKRV VDCQFAAFSI EDVRDAEEED AVDAFRQVLI
101: AKDLLPAAHD DYHTMLRFLK ARKFDLDRTV QMWKEMLNWR NEYRVDYILQ EFVFDEYEDV QHYYPHGYHG VDKEGRPVYI ERLGKVEPSK LMSVTTVDRF
201: LKYHVQGFEK AFAEKFPACS IAAKRHIVST TTILDVQGLN WMSFGKVAHD LVMRMQKIDG DNYPETLHQM FIVNAGSGFK LLWNTAKGFL DPRTTTKIHV
301: LGNKFQNKLL EVIDSSQLPD FLGGTCLCQN EGGCLRSDKG PWNDPAIMKL VNARGISYVR KANSFSDGDD SEIKLLAYKI AGGDISSAES GSDVWLSTSQ
401: IVQVMPHRNK ERMRDPASIH GLVQPVDAAA RTEDVGSINH TNSVTRRDQL KFIPHVANLI VHFIVKLLAC IFLILPGLGR FFEVKGAKKE LGNKCKPQLA
501: GVHSQEQHTL CGIEEDQLHP CLQRLQNLEA SVTELFKKPT RIPPEKEDMI HESLSRIKSI EYDLQKTKKV LLATASKQVE LAESLESLKE NNSKGTNSCW
601: LRKCNSSHHE R

Best Arabidopsis Sequence Match ( AT3G24840.2 )
(BLAST)

001: MPALGEILLV PETDKGKSKD YIEVSEDEKI TRTRSRSLKK KAIKASNKLT HSLRKRGKRV ADQYAPIVIE DVRDEEEEKA VNVFRKALVS LDLLPPRHDD
101: YHTMLRFLKA RRFDLEKTVQ MWEEMLKWRK ENGVDTIIQD FVYDEYEEVQ QYYPHGYHGV DREGRPVYIE RLGKIDPGKL MKVTTLERFL RYHVQGFEKT
201: FSEKFPACSI AAKRHINSST TIIDVHGVSW MSFRKLAQDL VMRMQKIDGD NYPETLNQMY IINAGNGFKL VWNTVKGFLD PKTTSKIHVL GNKYRSHLLE
301: IIDPSELPEF LGGNCKCAHE GGCMRFNKGP WNDPEIMKLV RSRDAMYKPK EMGLLENGEV AKLFSLRHVN TDMSSPDGGH VRERESHPEH DKRAQLSNQA
401: EAVGVGRMEQ SDSTSPLPNN LAVERSLTTS LQKVASFLAR FILQLLGSLC LMFRILGRLV NKQPENQLRP ELSVSVSQQQ VPPPQVHPCW LRLQNLETMV
501: TVLCDKPSSI PQEKEDILRD SLDRIKSIEQ DLQKTKKALF LTASKQIELA ECFENLKESS STGMRSCWPR HCRNFQAET

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.