CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99658	Soybean	cytosol, nucleus, plastid	12.12	94.74
KRG99659	Soybean	cytosol, nucleus, plastid	12.12	94.74
KRH46724	Soybean	cytosol, nucleus, plastid	93.43	93.43
KRG99756	Soybean	cytosol	59.43	91.69
KRG99755	Soybean	endoplasmic reticulum	29.29	88.78
VIT_07s0005g06640.t01	Wine grape	endoplasmic reticulum	63.8	62.03
Solyc09g060090.2.1	Tomato	cytosol	57.58	57.67
PGSC0003DMT400045517	Potato	cytosol	57.41	57.5
AT3G24840.3	Thale cress	cytosol	55.89	57.24
CDY52084	Canola	cytosol	53.87	54.51
GSMUA_Achr9P01730_001	Banana	plastid	31.14	53.62
CDX77382	Canola	cytosol	54.04	51.86
Bra015089.1-P	Field mustard	cytosol	43.77	48.6
KRH28724	Soybean	plastid	38.05	46.79
KRH76738	Soybean	plastid	37.88	46.78
KRH24439	Soybean	plastid	25.76	46.65
KRH45371	Soybean	cytosol	34.18	46.14
KRH62508	Soybean	cytosol	45.45	43.55
KRH56402	Soybean	cytosol	45.29	43.39
KRH51809	Soybean	nucleus	43.1	43.24
KRH61132	Soybean	cytosol	42.93	43.07
GSMUA_Achr6P06610_001	Banana	mitochondrion	31.31	42.76
KRH51503	Soybean	cytosol	41.08	42.58
KRH29420	Soybean	cytosol, nucleus, plastid	40.24	42.45
KRH07662	Soybean	cytosol	43.94	42.16
KRH60806	Soybean	cytosol	40.24	41.78
KRH15161	Soybean	cytosol	44.28	41.75
KRH29416	Soybean	cytosol	44.11	41.65
KRH60804	Soybean	cytosol	43.6	41.51
KRH69861	Soybean	plastid	38.72	41.44
KRH08168	Soybean	plastid	38.72	41.44
KRH24438	Soybean	cytosol	43.77	41.34
KRH05860	Soybean	cytosol	43.27	41.12
KRH51499	Soybean	cytosol	42.93	39.78
KRH77370	Soybean	cytosol	30.3	38.88
KRH28067	Soybean	cytosol	29.12	37.61
KRH36621	Soybean	cytosol	14.65	26.44
KRH01941	Soybean	cytosol	14.31	26.23
KRH51210	Soybean	cytosol	14.31	26.15
KRH11617	Soybean	cytosol	14.48	26.14
KRH14208	Soybean	cytosol	13.47	24.84
KRH65859	Soybean	cytosol	5.89	24.48
KRH46410	Soybean	cytosol	13.8	24.26
KRG82898	Soybean	cytosol	7.41	23.4
KRH73923	Soybean	cytosol	8.08	22.86
KRH46406	Soybean	cytosol	9.93	22.78
KRH75081	Soybean	extracellular, mitochondrion	4.71	22.76
KRG98457	Soybean	cytosol	14.31	20.73
KRH46400	Soybean	cytosol	9.09	20.07
KRG82897	Soybean	cytosol	3.03	16.51

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100820317	Gene3D:3.40.525.10	MapMan:35.1	EMBL:ACUP02011298	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlantsGene:GLYMA_18G169800	InterPro:IPR001251	InterPro:IPR036865
UniProt:K7MSU9	EnsemblPlants:KRG99773	ProteinID:KRG99773	ProteinID:KRG99773.1	ProteinID:KRG99774.1	PFAM:PF00650
PFAM:PF03765	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF100	SMART:SM00516	SMART:SM01100
SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000296698D	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:-:39733569..39743990

Molecular Weight (calculated)

67507.6 Da

IEP (calculated)

8.504

GRAVY (calculated)

-0.505

Length

594 amino acids

Sequence
(BLAST)

001: MPGEEVLAQE DERGRCFEPE ISEDEWRKSR ARSLRRKAMT ASTRLTYSLR KRNTRVADSD FASIFIEDVR DANEEKAVNS FRQVLLTRDL LPDSHDDYHK
101: MLRFLKARKF DIDKTVQMWA DMLHWRKEYG VDCILQDFVY KEYEEVQCYY PHGYHGVDKE GRPVYIERLG KVEPSKLMNV TTVDRFLKYH VQGFEKMFKE
201: KFPACSIAAK RHIDKTTTIL DVHGVNWVSF SKVAHDLVMR MQKIDGDNYP ETLNQMFIVN AGSGFKLLWN TAKGFLDPRT TAKIHVLGNK FQSRLLEIID
301: SSQLPDFLGG SCSCPNDGGC LRSNKGPWND PDILKLLHSR EAMKLTKFGS SSVADVVDVK SYASKVTSTE ISEPLSASAV RLHPSAFVQS VPSSEKKRMR
401: DSAPTGNELE PVNAAREVVG DVDSTSDSSN NYLRRLLEKP IPYITSILAQ ITVKLLTCIY LVFVALGKFF VVHSVDNQPR SHGQTESAQS NSQEQLITPA
501: IKEPLWQRLQ NLEAVVSEMA NKPKTIPPEK EDILQESLSR IKCIEYDLQK TKKALLATAS KQVELAKSLE SLKDSKFDGT NSCWPKNRSY APGR

Best Arabidopsis Sequence Match ( AT3G24840.2 )
(BLAST)

001: MPALGEILLV PETDKGKSKD YIEVSEDEKI TRTRSRSLKK KAIKASNKLT HSLRKRGKRV ADQYAPIVIE DVRDEEEEKA VNVFRKALVS LDLLPPRHDD
101: YHTMLRFLKA RRFDLEKTVQ MWEEMLKWRK ENGVDTIIQD FVYDEYEEVQ QYYPHGYHGV DREGRPVYIE RLGKIDPGKL MKVTTLERFL RYHVQGFEKT
201: FSEKFPACSI AAKRHINSST TIIDVHGVSW MSFRKLAQDL VMRMQKIDGD NYPETLNQMY IINAGNGFKL VWNTVKGFLD PKTTSKIHVL GNKYRSHLLE
301: IIDPSELPEF LGGNCKCAHE GGCMRFNKGP WNDPEIMKLV RSRDAMYKPK EMGLLENGEV AKLFSLRHVN TDMSSPDGGH VRERESHPEH DKRAQLSNQA
401: EAVGVGRMEQ SDSTSPLPNN LAVERSLTTS LQKVASFLAR FILQLLGSLC LMFRILGRLV NKQPENQLRP ELSVSVSQQQ VPPPQVHPCW LRLQNLETMV
501: TVLCDKPSSI PQEKEDILRD SLDRIKSIEQ DLQKTKKALF LTASKQIELA ECFENLKESS STGMRSCWPR HCRNFQAET

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:A0A178VMA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.