CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61132	Soybean	cytosol	94.09	94.09
KRH05860	Soybean	cytosol	79.22	75.04
KRH15161	Soybean	cytosol	79.05	74.29
VIT_18s0001g12950.t01	Wine grape	cytosol	70.27	66.77
KRH60804	Soybean	cytosol	68.07	64.58
KRH29416	Soybean	cytosol	68.07	64.07
KRH24438	Soybean	cytosol	67.91	63.91
KRH51499	Soybean	cytosol	66.72	61.62
KRH76738	Soybean	plastid	45.78	56.34
KRH28724	Soybean	plastid	45.61	55.9
KRH24439	Soybean	plastid	29.9	53.96
KRH29420	Soybean	cytosol, nucleus, plastid	49.49	52.04
KRH08168	Soybean	plastid	48.65	51.89
KRH69861	Soybean	plastid	48.31	51.53
KRH51503	Soybean	cytosol	49.83	51.48
KRG99756	Soybean	cytosol	33.11	50.91
KRH60806	Soybean	cytosol	48.99	50.7
KRH45371	Soybean	cytosol	33.45	45.0
KRH62508	Soybean	cytosol	46.79	44.68
KRH56402	Soybean	cytosol	45.95	43.87
KRG99773	Soybean	cytosol, nucleus, plastid	43.24	43.1
KRH46724	Soybean	cytosol, nucleus, plastid	42.74	42.59
KRH77370	Soybean	cytosol	32.26	41.25
KRH07662	Soybean	cytosol	42.74	40.87
KRH28067	Soybean	cytosol	31.59	40.65
KRG99659	Soybean	cytosol, nucleus, plastid	3.89	30.26
KRG99658	Soybean	cytosol, nucleus, plastid	3.89	30.26
KRH01941	Soybean	cytosol	15.54	28.4
KRH51210	Soybean	cytosol	15.54	28.31
KRH36621	Soybean	cytosol	15.54	27.96
KRH11617	Soybean	cytosol	15.37	27.66
KRH65859	Soybean	cytosol	6.25	25.87
KRH73923	Soybean	cytosol	8.95	25.24
KRH14208	Soybean	cytosol	13.68	25.16
KRH46410	Soybean	cytosol	14.36	25.15
KRH75081	Soybean	extracellular, mitochondrion	5.07	24.39
KRH46406	Soybean	cytosol	10.64	24.32
KRG82898	Soybean	cytosol	7.6	23.94
KRH46400	Soybean	cytosol	9.8	21.56
KRG98457	Soybean	cytosol	14.86	21.46
KRG99755	Soybean	endoplasmic reticulum	6.59	19.9
KRG82897	Soybean	cytosol	3.55	19.27

Protein Annotations

Gene3D:1.10.8.20	EntrezGene:100811161	Gene3D:3.40.525.10	MapMan:35.1	EMBL:ACUP02003392	InterPro:CRAL-TRIO_dom
InterPro:CRAL-TRIO_dom_sf	InterPro:CRAL/TRIO_N_dom	InterPro:CRAL/TRIO_N_dom_sf	EnsemblPlantsGene:GLYMA_06G030000	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150	UniProt:I1K7Q1
InterPro:IPR001251	InterPro:IPR036865	EnsemblPlants:KRH51809	ProteinID:KRH51809	ProteinID:KRH51809.1	PFAM:PF00650
PFAM:PF03765	PRINTS:PR00180	PFscan:PS50191	PANTHER:PTHR23324	PANTHER:PTHR23324:SF145	SMART:SM00516
SMART:SM01100	SUPFAM:SSF46938	SUPFAM:SSF52087	UniParc:UPI000296E639	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:+:2358189..2362843

Molecular Weight (calculated)

67247.0 Da

IEP (calculated)

8.705

GRAVY (calculated)

-0.462

Length

592 amino acids

Sequence
(BLAST)

001: MSTNLCFEGM DERRERKLSF ENNSEDDRWA KIGSLKKKAL FASTKFRHSF KKKRSRKIDS RSNSLSIEDV RDVKDLQAVD AFRQALVLDN MLPPIHDDYH
101: MLLRFLKARK FDIEKAKHMW ANMIQWRKEY GTDTIMEDFE FKELNEVLKY YPHGYHGVDR EGRPVYIERL GKVDPNRLMQ VTTLERYLRY HVQGFEKTFA
201: VKFPACSIAA KRHIDSSTTI LDVQGVGFKN LTKSARELIT RLQKIDGDYY PETLCQMFII NAGPGFKMLW NTVKTFLDPK TTSKIHVLGN KFHSKLLEII
301: DESELPEFLA GSCTCVDQGG CMRSDKGPWQ DPNILKMVLS GEVGCSKQIV TVSNDEGRVI ECDKISYPMI RGSDTSTGES GSEVEDIASP KACGNCISSM
401: LTPVLEEARM VGKTSHAGSL VEYVPMVDKA INVGSKEKQA TPRKLFCSTA GFILALYTFA RSITFRVTKG MRYSESNSAR NILNMTVDSI SKGESRPPSY
501: SPGGFTKANL PSSTLKRLGE LEEKVDMLQS KPSVMPHEKE ELLNAAVYRV DALEAELIAT KKALYEALIR QEELMAYIDS QERDKFKRKG CW

Best Arabidopsis Sequence Match ( AT2G21520.1 )
(BLAST)

001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF

Arabidopsis Description

Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.