Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 4
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0038g04470.t01 | Wine grape | cytosol | 76.56 | 76.32 |
| KRH05860 | Soybean | cytosol | 72.39 | 72.16 |
| KRH15161 | Soybean | cytosol | 72.23 | 71.43 |
| KRH51809 | Soybean | nucleus | 66.77 | 70.27 |
| KRH61132 | Soybean | cytosol | 65.97 | 69.43 |
| VIT_03s0038g04480.t01 | Wine grape | cytosol | 52.17 | 52.42 |
| VIT_04s0023g02400.t01 | Wine grape | cytosol, nucleus, plastid | 44.62 | 51.87 |
| VIT_19s0015g01160.t01 | Wine grape | cytosol | 45.91 | 46.05 |
| VIT_07s0005g06640.t01 | Wine grape | endoplasmic reticulum | 41.57 | 42.39 |
| VIT_02s0154g00510.t01 | Wine grape | cytosol | 24.88 | 40.26 |
| VIT_10s0116g00400.t01 | Wine grape | cytosol | 15.89 | 29.29 |
| VIT_19s0015g00760.t01 | Wine grape | cytosol | 14.13 | 26.04 |
Protein Annotations
| Gene3D:1.10.8.20 | EntrezGene:100248963 | wikigene:100248963 | Gene3D:3.40.525.10 | MapMan:35.1 | ProteinID:CBI19741 |
| ProteinID:CBI19741.3 | InterPro:CRAL-TRIO_dom | InterPro:CRAL-TRIO_dom_sf | InterPro:CRAL/TRIO_N_dom | InterPro:CRAL/TRIO_N_dom_sf | ncoils:Coil |
| UniProt:E0CQH2 | EMBL:FN595227 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004518 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0090305 | InterPro:IPR001251 |
| InterPro:IPR036865 | EntrezGene:LOC100248963 | wikigene:LOC100248963 | PFAM:PF00650 | PFAM:PF03765 | PRINTS:PR00180 |
| PFscan:PS50191 | PANTHER:PTHR23324 | PANTHER:PTHR23324:SF145 | SMART:SM00516 | SMART:SM01100 | SUPFAM:SSF46938 |
| SUPFAM:SSF52087 | UniParc:UPI00015C7B88 | ArrayExpress:VIT_18s0001g12950 | EnsemblPlantsGene:VIT_18s0001g12950 | EnsemblPlants:VIT_18s0001g12950.t01 | unigene:Vvi.25104 |
| RefSeq:XP_002281429 | RefSeq:XP_002281429.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr18:-:11035878..11042058
Molecular Weight (calculated)
70951.1 Da
IEP (calculated)
8.072
GRAVY (calculated)
-0.528
Length
623 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGPLDRFAR PCFEGANHDE RRERKSDFEN SEDDRRTRIG NLKKKAINAS SKFKHSLKKK GRRKSHDHLL SVSIKDVRDV EELQAVEAFR QALISDDLLP
101: DRHDDYHMLL RFLKARKFDM EKAKHMWTEM IHWRKNFGTD TILEDFEFKE LNEVLKYYPQ GYHGVDKEGR PVYIERLGKV DSNKLVQVTT LDRYVKYHVQ
201: EFEKCFAFKF PACSVAAKRH IDSNTTLLDV QGVGFKNLTK NARDLIMRLQ KIDGDNYPET LCQMFIINAG PGFRLLWNTV KTFLDPKTTS KIHVLGNKYQ
301: SKLLEIIDAS ELPEFLGGSC ICADQGGCLK SDKGPWKDPN ILKMVLSGEA QFSRRIVTVS NSDGRVITKE KPIYSVIKSS DTSTAESGSE VEEFTSPEVT
401: RGYLHPRLTP VREEVRMAGK VNSAGGFSEY DEVPMVDKAV DAEWKKQLSL QDPCDSRGIL SLPRAEKTPE GLCAKIWGVL ITFFLALATL FHSVASRVTK
501: KLPDSVSNSG HNIPNLTLEP ISEEELRPPS PAPRLTEADL FSSVLKRVGE LEEKVDLLQA KPFKMPHEKE ELLNAAVCRV DALEAELIAT KKALHEALMR
601: QEELLAYIDR QEEAKSQKKK FCW
101: DRHDDYHMLL RFLKARKFDM EKAKHMWTEM IHWRKNFGTD TILEDFEFKE LNEVLKYYPQ GYHGVDKEGR PVYIERLGKV DSNKLVQVTT LDRYVKYHVQ
201: EFEKCFAFKF PACSVAAKRH IDSNTTLLDV QGVGFKNLTK NARDLIMRLQ KIDGDNYPET LCQMFIINAG PGFRLLWNTV KTFLDPKTTS KIHVLGNKYQ
301: SKLLEIIDAS ELPEFLGGSC ICADQGGCLK SDKGPWKDPN ILKMVLSGEA QFSRRIVTVS NSDGRVITKE KPIYSVIKSS DTSTAESGSE VEEFTSPEVT
401: RGYLHPRLTP VREEVRMAGK VNSAGGFSEY DEVPMVDKAV DAEWKKQLSL QDPCDSRGIL SLPRAEKTPE GLCAKIWGVL ITFFLALATL FHSVASRVTK
501: KLPDSVSNSG HNIPNLTLEP ISEEELRPPS PAPRLTEADL FSSVLKRVGE LEEKVDLLQA KPFKMPHEKE ELLNAAVCRV DALEAELIAT KKALHEALMR
601: QEELLAYIDR QEEAKSQKKK FCW
001: MSGPLDRFAR PCFEGFLSSD EKKERKSDFE NSEDERRTRI GSLKKKAINA STKFKHSLKK KSGRRKSDGR VSSVSIEDVR DVEELQAVDA FRQSLLMDEL
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF
101: LPDRHDDYHM MLRFLKARKF DVEKAKQMWA DMIQWRKEFG TDTIIQDFDF EEINEVLKHY PQCYHGVDKE GRPIYIERLG KVDPNRLMQV TSMDRYVRYH
201: VKEFERSFMI KFPSCTISAK RHIDSSTTIL DVQGVGLKNF NKSARDLITR LQKIDGDNYP ETLHQMFIIN AGPGFRLLWN TVKSFLDPKT SAKIHVLGYK
301: YLSKLLEVID VNELPEFLGG ACTCADQGGC MLSDKGPWKN PEIVKMVLHG GAHRARQVVK VLNSEGKVIA YAKPSYTWIK GSDTSTAESG SDAEDIGSPK
401: AIKSFSHLRL TPVREEAKIA GETSLAGSFP GYDEYVPMVD KAVDATWKVK PAIQRVASRG ALMSPTVPKD HEGIKARVLV MFMAFLMAVF TFFRTVTKKL
501: PATTTSSPAE TQGNAIELGS NGEGVKEECR PPSPVPDLTE TDLLNCVTKK LTELEGKIGT LQSKPNEMPY EKEELLNAAV CRVDALEAEL IATKKALYEA
601: LMRQEELLAY IDRQEEAQFQ KMKKKKKKHL FCF
Arabidopsis Description
Sec14p-like phosphatidylinositol transfer family protein [Source:UniProtKB/TrEMBL;Acc:B3H588]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.